Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0685 ATGAGAGCTTTTCCCAAACAAACAATCATACTATTGCTAGCTTTCTTTATCTTCTTCACCCATCTTTTCCACTCACGTGCCTCAGGAGTCCCCCACCGTCACTGCAAAGCATGGCTCGTGCAATCCATTCCCACCGATATGCCTCATCTCTCCCACGTTCCCGGCGTTCTCTCTACTGGGGATGTTCTCCGGTGGCTCGCGGCCAACTCTACTCGGCGACTGGACATAATTGCTCAGTACTGGCAGCTGGTGGCTTCTCCCAATGATCCTCGTTCTGGAGATTATGGCTACTCCGAAAGTGATATGCTTAAATTTGGTGCCCATGAAGGTGCTGCCGTTTATAAAGCCATAGATGCTGCTGCCGATGATCGTAATGTTAGAATCAGGTTACTGTCTCACTCGGGAGTATATCCAGATTACACCACAGAACCATCTAAACTTGCTTCAGGAAGACCAAATGTTAAGAATGTGACCTTATTACTGGAAGATTGGTGGGGTTCGGGCATTGTTCATGCCAAAGTCTGGATATCAGATAAACGGAACGTATATATTGGATCCGCAAACAATGACTGGAAATCGCTTACTCAGGTTAAGGAAGTTGGAATCTATCTTACTGGTTGCCCAAGAATAGCTGAAAGTGTCGAGGTCTACTTCAACAATTTATGGAAACTCGCATCTCTTAATTCTTCAGCTTACACTAAAACAGTATTTGATCAACAGTGGCAAGTTGAAAGAAAGGTTCCTTGCTGGTCTCATTTCGTTGACCCAAAAAAGAGATGCGAGTCTCCTCTTCCTGGGTACTTAAAGACTCCTCATGTTGCAGGATATCCTGTTCTTTCTGATCCCTATATGTTTAAAGTTTCAATTGAGACTCCTGGAAGTAACCGTTCAACAGAGCTCCCCCAAGCTAGCTATCTCTCATTCGCTCCTCCTGAGCTGTCATTTGGCAAGTATCAGGCTGATGAACAGGCTTGGGTTGATACAATTAAATCAGTTGGAATGAAGGAGACAGTTAGAATCAGCACCATGGACTGGTTGGGTCAGTCACAGTATACTGACCAAACTGTTTACTGGTCATCCCTGTCCTCTGCGATATCAGAGGTTGTGTTTTCCAAGCATGCGACAGTAAAAATATTGGTGGCATATTGGAGTCACTTCATCAATAGCACAGATGTGTACCTGAAGTCTCTCCTCTTCTCCAACAATCTCTGCTCATCTTCAAAGTACAATAAGTGCTTTGGAAAAGTTGAGATCAAGTACTATATGGTTCCAGGTTTCAATTCGACAGGGCCTGCCCTTAAGGACGGTGCTGGTACAGGAAATACATACCCTGGTTTTACGAGGGTCAATCATGGAAAATATGCAGTTTCTGACGTACGAGCTCACATTGGAACTAGCAATCTCATATGGGACTACTTTTATACCACATCAGGAGTCAGCTTTGGGACACACGACCCTGCTATTGTTTCACAACTTCAGCAGATTTTCGATGCTGACTGGCATTCACCTTACTGTGTCCCAGTTGAAAAACTGGAACAACGCCTTTCTTCTTCATTCTAG 1560 0.4449 MRAFPKQTIILLLAFFIFFTHLFHSRASGVPHRHCKAWLVQSIPTDMPHLSHVPGVLSTGDVLRWLAANSTRRLDIIAQYWQLVASPNDPRSGDYGYSESDMLKFGAHEGAAVYKAIDAAADDRNVRIRLLSHSGVYPDYTTEPSKLASGRPNVKNVTLLLEDWWGSGIVHAKVWISDKRNVYIGSANNDWKSLTQVKEVGIYLTGCPRIAESVEVYFNNLWKLASLNSSAYTKTVFDQQWQVERKVPCWSHFVDPKKRCESPLPGYLKTPHVAGYPVLSDPYMFKVSIETPGSNRSTELPQASYLSFAPPELSFGKYQADEQAWVDTIKSVGMKETVRISTMDWLGQSQYTDQTVYWSSLSSAISEVVFSKHATVKILVAYWSHFINSTDVYLKSLLFSNNLCSSSKYNKCFGKVEIKYYMVPGFNSTGPALKDGAGTGNTYPGFTRVNHGKYAVSDVRAHIGTSNLIWDYFYTTSGVSFGTHDPAIVSQLQQIFDADWHSPYCVPVEKLEQRLSSSF 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0685 519 PANTHER PHOSPHOLIPASE D - RELATED 32 514 - -
Lele04g0685 519 CDD PLDc_vPLD3_4_5_like_2 305 501 - -
Lele04g0685 519 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 166 193 IPR001736 GO:0003824
Lele04g0685 519 SUPERFAMILY Phospholipase D/nuclease 64 224 - -
Lele04g0685 519 SMART pld_4 446 472 IPR001736 GO:0003824
Lele04g0685 519 SMART pld_4 166 193 IPR001736 GO:0003824
Lele04g0685 519 Pfam PLD-like domain 109 222 IPR025202 -
Lele04g0685 519 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 446 472 IPR001736 GO:0003824
Lele04g0685 519 Gene3D Endonuclease Chain A 58 226 - -
Lele04g0685 519 CDD PLDc_vPLD3_4_5_like_1 39 207 - -
Lele04g0685 519 Gene3D Endonuclease Chain A 304 502 - -
Lele04g0685 519 SUPERFAMILY Phospholipase D/nuclease 314 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0685 Lele-ChrLele04 4167101 4170369 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0685 04 4167101 4170369 Lele25g0674 25 4256202 4258206 CCT
Lele04g0685 04 4167101 4170369 Lele26g0682 26 4349839 4351835 CCT
Lele04g0685 04 4167101 4170369 Lele27g1415 27 20425467 20427467 CCT
Lele04g0685 04 4167101 4170369 Lele28g0666 28 4258456 4263795 CCT
Lele04g0685 04 4167101 4170369 Lele04g0685 04 4167101 4170369 ECH
Lele01g0683 01 4016009 4024576 Lele04g0685 04 4167101 4170369 hybridization
Lele02g0671 02 4029613 4033130 Lele04g0685 04 4167101 4170369 hybridization