Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0681 ATGGAGGAGGAGAAAAATACAGTGTTTGGCAAGTATGAAATAGGTAGGCTTCTGGGCAAAGGTACTTTCGCCAAGGTGTATCACGGCAAACAGATGGCCACCGGCGAGAGCGTCGCAATCAAGATCGTGAGCAAGGAGCAGGTAAGGAAGGAGGGCATGATGGAGCAGATCAAGCGCGAGATTTCCGTCATGCGATTGGTTCGTCACCCCAACGTGGTTAAGCTCAAGGAGGTCATGGCCACCAAGACCAAAATTTTCTTCGTCATGGAGTACGTCCGCGGCGGAGAGCTCTTCGCCAAGGTCGCCAGAGGCAAACTCAAGGAAGATGTCGCTCGCAAGTACTTCCAACAGTTAATCAGCGCCGTCGATTTCTGTCACAGCAGAGGAGTATCGCACCGGGATCTCAAGCCCGAAAATTTGTTGCTGGACGAGAACGAGAATCTCAAAATCTCCGACTTTGGCCTCTCGGCATTGCCGGAACAGCTCCGTCAAGACGGTCTCCTCCACACCCAGTGTGGTACTCCGGCATATGTCGCCCCCGAGGTGTTGAGAAAGAAAGGGTATGATGGGTCCAAGGCTGATATATGGTCGTGCGGTGTCATTCTGTATGCGTTGCTCGCCGGGTTTCTTCCTTTCCAGAACGAGAATCTCATGAGCATGTATAGCAAGGTTTTAAGAGCAGATTTCCAATATCCTCCATGGTTCTCTGCGGAATCGAGGAGATTGATTTCCAAAATCCTCGTTGCGGACCCGGAGAGACGGGCCGCGATCCCCACAATAATGCGGGTCCCATGGTTTCTGAAAGGTTTCTCGAGGCCTTTCGCTTTTCAACTAGAGGAACCCGTTTCGGAGAAAGCCGATGACAAGGAGCCGCAGAAATCAGAACTCGCAAACCCAAAATCGAAACCTTCATCGCCCAAGTTTTTCAACGCTTTCGAGTTCATTTCGTCCATGTCTTCTGGGTTTGATTTGTCCGGGCTGTTCGAGTCCAAGAGGAAAACAGGGTCGATGTTCACATCCAAATACTCGGCCACGGCGATCGTATCGAAGATTGAGACGGTGGCGAAAGGGTTGAGTTTCAAGGTTGGGAATGAGAAGGGATTCAAGATCAGTCTGCAAGGGCCGTCGGAGGGAAGGAAAGGGAAGCTGACCGTGACGGCGGAGGTGTTCGAGGTGGCACCGGAGGTCGCCGTGGTGGAGTTTTCAAAGAGCTCCGGCGATACTCTGGAATACGCAAAGTTTTGTGAGGAAGACGTAAGGCCGGCGCTGAAAGACATAGTATGGACGTGGCAAGGTGACAGCCCGTGCAAGGGTAACATCGGCGGCGGCTACGGAGAAGAATGTCGGGAACACGTAATCAGCAACGCAGTATAG 1374 0.5226 MEEEKNTVFGKYEIGRLLGKGTFAKVYHGKQMATGESVAIKIVSKEQVRKEGMMEQIKREISVMRLVRHPNVVKLKEVMATKTKIFFVMEYVRGGELFAKVARGKLKEDVARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDENENLKISDFGLSALPEQLRQDGLLHTQCGTPAYVAPEVLRKKGYDGSKADIWSCGVILYALLAGFLPFQNENLMSMYSKVLRADFQYPPWFSAESRRLISKILVADPERRAAIPTIMRVPWFLKGFSRPFAFQLEEPVSEKADDKEPQKSELANPKSKPSSPKFFNAFEFISSMSSGFDLSGLFESKRKTGSMFTSKYSATAIVSKIETVAKGLSFKVGNEKGFKISLQGPSEGRKGKLTVTAEVFEVAPEVAVVEFSKSSGDTLEYAKFCEEDVRPALKDIVWTWQGDSPCKGNIGGGYGEECREHVISNAV 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0681 457 FunFam Non-specific serine/threonine protein kinase 5 305 - -
Lele04g0681 457 MobiDBLite consensus disorder prediction 282 304 - -
Lele04g0681 457 CDD CIPK_C 310 424 - -
Lele04g0681 457 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0681 457 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Lele04g0681 457 Pfam NAF domain 306 362 IPR004041 GO:0007165
Lele04g0681 457 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 424 - -
Lele04g0681 457 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
Lele04g0681 457 Gene3D Transferase(Phosphotransferase) domain 1 92 271 - -
Lele04g0681 457 ProSiteProfiles NAF domain profile. 304 329 IPR018451 GO:0007165
Lele04g0681 457 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0681 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Lele04g0681 457 SUPERFAMILY Protein kinase-like (PK-like) 8 290 IPR011009 -
Lele04g0681 457 Gene3D Kinase associated domain 1, KA1 304 429 - -
Lele04g0681 457 MobiDBLite consensus disorder prediction 282 296 - -
Lele04g0681 457 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Lele04g0681 457 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0681 457 CDD STKc_SnRK3 11 265 - -
Lele04g0681 457 FunFam Non-specific serine/threonine protein kinase 304 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0681 Lele-ChrLele04 4154626 4155999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0681 1 434 CBL-interacting serine-threonine protein kinases AT5G10930 70.776 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele04g0681 Pkinase 1.6e-74 CL0016