Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0676 ATGTCAATATTGCAGAAAGGCGATTCGGTTCAAATCAGGGAAGTTTGGAAGGACAATCTAGAAGAAGAGTTTGCATTGATCCGTGAAATTGTTGACGAATATAATTATATCGCCATGGACACGGAGTTCCCCGGAGTGGTTCTTCGCCCGGTGGGTAATTTTAAAAACATCAATGAATATAACTATCAAACATTGAAGGACAACGTTGATATGTTGAAGTTGATCCAATTGGGACTCACCTTCTCCGATGAGCATGGAAATCTTCCTACTTGCGGCACTGACAAACGTTGCATTTGGCAATTTAACTTCCGCGAGTTTAACGTTAGCGAAGACATCTTCGCGAGTGATTCAATTGAACTACTGCGCCAGTGTGGAATTGATTTTAAGAAGAACAACGAGAAGGGCATTGACGTTAATCGATTTGGGGAGCTTCTGATGTCTTCAGGGGTGGTGTTAAACAGTGAAGTCCATTGGGTCACATTCCATAGCGGGTACGATTTTGGTTACCTCCTTAAGTCATTGACCTGCCGTAGCTTGCCAGATACACAGTCGGGATTCTTTACGTTGATCAACGTGTACTTCCCTACGGTGTATGATATCAAGCATCTGATGAAGTTCTGCAACAACCTCCATGGTGGATTGAACAAACTTGCAGAACTGTTGGAAGTTGAGAGGATTGGTGCTTGCCATCAAGCCGGGTCCGATAGCTTACTTACCTCTTGTACATTTAGAAAGTTGAGGGATGTGTTCTTCAATGGCTCCACAGAGAAATATTCTGGTGTCTTGTATGGGTTAGATGTCGAAAATGGACAGGCTAATTGA 822 0.4307 MSILQKGDSVQIREVWKDNLEEEFALIREIVDEYNYIAMDTEFPGVVLRPVGNFKNINEYNYQTLKDNVDMLKLIQLGLTFSDEHGNLPTCGTDKRCIWQFNFREFNVSEDIFASDSIELLRQCGIDFKKNNEKGIDVNRFGELLMSSGVVLNSEVHWVTFHSGYDFGYLLKSLTCRSLPDTQSGFFTLINVYFPTVYDIKHLMKFCNNLHGGLNKLAELLEVERIGACHQAGSDSLLTSCTFRKLRDVFFNGSTEKYSGVLYGLDVENGQAN 273
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0676 273 Pfam CAF1 family ribonuclease 159 219 IPR006941 -
Lele04g0676 273 SUPERFAMILY Ribonuclease H-like 12 265 IPR012337 -
Lele04g0676 273 FunFam Putative CCR4-associated factor 1 7 2 269 - -
Lele04g0676 273 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10 266 IPR039637 GO:0004535|GO:0030014
Lele04g0676 273 Gene3D - 1 269 IPR036397 GO:0003676
Lele04g0676 273 Pfam CAF1 family ribonuclease 15 136 IPR006941 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele04g0676 Lele-ChrLele04 4106930 4107751 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0676 01 3941014 3952215 Lele04g0676 04 4106930 4107751 hybridization
Lele02g0660 02 3965863 3966684 Lele04g0676 04 4106930 4107751 hybridization