Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0664 ATGGTTAGTCGGCGAGCACATACAGGTTTTCTTCTGGACCGATATGGGGTGATTCTTCTTACTGATGACATGACTGGAGAAAGATCTGTTGGGAGAGATGGAACGGTGGAGGAAGATGAGGATGAAAAGCTAGAACTGGTAGGGGCAGCAAAAGCGGATGAGGGCGAAGAAAAACGTGAGTTGGACGTGGAATATGAGCAAAATCCGCTCGAGGTGAGGGTTAGGTTAGCGGGGCTTGAAGAAAAAGCGGGGATGGGGGTTTCGGTCGAGAACCCGCCACTTTCCCTCGGGTGCTCGGAGCCTGGATTAGGGTTTTGTGGGCGGCGTTCCGTGTTTCATTGCGGCTTGGATCAGTCACGTCGAACCGTAGCAATGGCGGAACAGACCGAGAAGGCGTTCTTGAAGCAACCTAAAGTGTTTCTCAGTTCGAAGAAATCCGGAAAGGGTAAGAGGCCCGGAAAAGGAGGGAACAGATTCTGGAAAAGCATCGGGTTGGGTTTCAAGACTCCCAGAGAAGCCATTGAAGGGACTTATGTTGATAAGAAATGCCCATTCACTGGTACTGTGTCCATCCGGGGCCGCATTCTTGCCGGTACCTGCCATAGTGCCAAGATGACAAGGACTATCATTGTTCGCCGCAACTACCTTCATTTTGTGAAAAAATACCAAAGGTATGAAAAGAGACACTCAAACATTGCAGCACATATATCGCCATGTTTCCGTGTGAAGGAGGGAGACCATGTTATCATTGGGCAATGCAGGCCTCTTTCAAAGACTGTAAGGTTTAATGTGCTGAAAGTGATTCCAGCTGGGTCTTCTGGAGGTGTGAAGAAGGCTTTTACTGGAGCGTAA 852 0.493 MVSRRAHTGFLLDRYGVILLTDDMTGERSVGRDGTVEEDEDEKLELVGAAKADEGEEKRELDVEYEQNPLEVRVRLAGLEEKAGMGVSVENPPLSLGCSEPGLGFCGRRSVFHCGLDQSRRTVAMAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYVDKKCPFTGTVSIRGRILAGTCHSAKMTRTIIVRRNYLHFVKKYQRYEKRHSNIAAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGVKKAFTGA 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0664 283 Pfam Ribosomal protein S17 198 266 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele04g0664 283 TIGRFAM uS17_arch: ribosomal protein uS17 178 267 IPR028333 -
Lele04g0664 283 FunFam 40S ribosomal protein S11 125 282 - -
Lele04g0664 283 PRINTS Ribosomal protein S17 family signature 245 255 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele04g0664 283 PRINTS Ribosomal protein S17 family signature 255 262 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele04g0664 283 PRINTS Ribosomal protein S17 family signature 212 235 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele04g0664 283 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 134 273 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele04g0664 283 Gene3D - 116 282 - -
Lele04g0664 283 Pfam Ribosomal_S17 N-terminal 128 196 IPR032440 -
Lele04g0664 283 ProSitePatterns Ribosomal protein S17 signature. 245 257 IPR019979 GO:0003735|GO:0005840|GO:0006412
Lele04g0664 283 SUPERFAMILY Nucleic acid-binding proteins 192 271 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0664 Lele-ChrLele04 4007094 4012450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0664 125 283 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 91.195 1.17e-96 279