Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0647 ATGGGAAAGAAAACTTGGCCTTTGTTCCATACAATTGCTCCCTTGATTCCGGTGCTGTTTATTTCCCTTTTGTTTGAAGTCTGTTTGGGTGCGATTCTAAATGCAGGAAAGATCTCTCCAGGGTTTCAAGGCACTCAAATGAGATACATAGACAACGATGGCAAGTTTCTCGAGTCCAACAATGGAGAATTTGTCTTTGGCTTCATCTCTACAGCAAATGATACCTCTTCATTTCTTCTAGGAATCGTCCACAAGGCCACTGTCACTGTGGTTTGGACTGCAAATAGAGCAAATCCTGTTTCAGATTCCGATAACTTTGTGTTTGATGAAAATGGCAACGCCTTCTTACGGAAAGAAAAATCCATGGTTTGGTCTACAAATACTAGTGACGAAGGTGTCTCTTCAATGGAATTATTGGACACAGGAAACCTGGTCTTGCTTGGGAAGAATGACAACGTTGTTTGGCAGAGTTTTAGCTTCCCGACAGATACCTTGTTGCCAAATCAGGATTTAACGGAAGGAATGAAACTGATCAGTGAGCCTTCACCTAATGATAACTTGACCTATGTTCTTGAGATCAAATCTGGTGACGTCATTCTTTCTGCTGATTTCCCAGTAGCTCCTCAGATTTACTGGTCTTTACAGAAGGATAATCGCAAGACCATTGATAAAGATGGCGGTCTTGTTGCTTCAGCATCACTGAGTGAAAATTCATGGAGGTTCTATGATAAAAACAAGTCCTTGTTATGGCAATTCATATTTTCTGGAGATTCTTCAGAGACGAATACCACTTGGGTTGCTGTTTTGGGAAATAAAGGTTTTCTCACTTTCTCTGGTTTACGACATGAAAGTGCTAGTGTTTCTCCGATTAGGATTCCACAAAACTCTTGCAGTACACCACAACCTTGTGGCCCATATTACATATGTACAGGTAATAACAATTGTCACTGTCCTTCTGTTCTTAGCTCTCGTTCGGATTGCAAACCTAGGAATATTGTCTCTTCTTGTAATAACTCTAAAAGTTCTATAGAGCTCGTGAAAGGTGACCATGGAATCCATTACTTTGCGCTTGATTTTGTTCCACCCTCGTTGACAAGAACTGATTTGAATGGGTGCAAAGATTCTTGCCTTGGTAATTGCTCGTGCCTTGCTATGTTCTTCCATAACAATTCAGGGAACTGTTTTTTGTTAGACAACATAGGAAGCTTCGAGACTTCTGATGAAAATTCTGGGCTTGTTTCTTACATTAAGATCTCGACTGCTGGAGGCAGAGGTAATAACGAAAGGAGCAATAATCGCACCATAGTTGCTCTGGTCGTTGTCTTTTGTACATTGCTTGTAATATTGATTGTAGCTTATGTGGGATTTAAATGCTACAGAAGAAAGCCAAAATTGGATGATTCTTCTGGGCCAAATTATACAGAAGAAGACATTTTCTTGGAGAATTTAACTGGCATGCCAACTCGTTTCAGCTATAAAGATCTTGAAATAGCAACAAGTAATTTCTTAGTGAAGCTGGGACAAGGAGGTTTTGGTTCAGTTTATAAAGGGATTTTACCAGATGGAACTCATGTAGCTGTGAAGAAATTGGAATCCATTGGGCAAGGAAAGAAAGAGTTCAGAGCAGAAGTTAGCATAATTGGGAGCATTCATCATCATCATTTGGTGAAGCTTAAAGGGTTTTGTGCAGAAAAATCTCATAAGCTTCTTGCTTATGAATATATGCCAAATGGTTCATTGGACCAATGGCTATTCAAGAAAAGCGAAGGAGATCAGTTCATGTTGGATTGGAATACGAGGTTTAATATAGCACTTGGAACAGCAAAAGGGCTAGCTTATCTCCATGAAGATTGTGATTCCAAGATTGTTCATTGTGACATAAAACCAGAGAATGTTCTTCTTGATGACAAGTTCATGGCTAAAGTTTCAGACTTTGGTCTGGCCAAGTTAATGACTCGTGAACAGAGCCATGTTTTCACTACACTTAGAGGAACCAGGGGATATCTGGCACCAGAGTGGATCACAAACACTGCTATATCTGAGAAAAGTGATGTTTATAGCTACGGGATGATGTTGCTGGAGATCATTGGAGGGAGGAAGAATTATGATCCTAATGAAACTTCAGGGAAATCTCATTTCCCATCTCTTGCTTTTAGGATGATGGAACAAGGGAAGCTGAGAGATATTGCTGATTCAAAGCTGGAAATTGATGAAAACGATGAAAGACTTCGTAATGCTGTTAAGGTTTCGTTTTGGTGTTTGCAGGATGACATGTCTCGGAGACCTTACATGTCCCAAGTTGTTCAAATGCTTGAGGGTCTCTGTGTTGTTCCTGAGCCTCCAACATGTTCCCCATTGGGTTTTCGCCTTTACTCTTCTCTGTTTCAACCCAACCCAGAAGGAGTAGAACCATCAAACCCTAATCAAGATTCTTATATCTCTGCAGTTCAGCTTTCAGGACCAAGATAG 2469 0.4034 MGKKTWPLFHTIAPLIPVLFISLLFEVCLGAILNAGKISPGFQGTQMRYIDNDGKFLESNNGEFVFGFISTANDTSSFLLGIVHKATVTVVWTANRANPVSDSDNFVFDENGNAFLRKEKSMVWSTNTSDEGVSSMELLDTGNLVLLGKNDNVVWQSFSFPTDTLLPNQDLTEGMKLISEPSPNDNLTYVLEIKSGDVILSADFPVAPQIYWSLQKDNRKTIDKDGGLVASASLSENSWRFYDKNKSLLWQFIFSGDSSETNTTWVAVLGNKGFLTFSGLRHESASVSPIRIPQNSCSTPQPCGPYYICTGNNNCHCPSVLSSRSDCKPRNIVSSCNNSKSSIELVKGDHGIHYFALDFVPPSLTRTDLNGCKDSCLGNCSCLAMFFHNNSGNCFLLDNIGSFETSDENSGLVSYIKISTAGGRGNNERSNNRTIVALVVVFCTLLVILIVAYVGFKCYRRKPKLDDSSGPNYTEEDIFLENLTGMPTRFSYKDLEIATSNFLVKLGQGGFGSVYKGILPDGTHVAVKKLESIGQGKKEFRAEVSIIGSIHHHHLVKLKGFCAEKSHKLLAYEYMPNGSLDQWLFKKSEGDQFMLDWNTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDDKFMAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNTAISEKSDVYSYGMMLLEIIGGRKNYDPNETSGKSHFPSLAFRMMEQGKLRDIADSKLEIDENDERLRNAVKVSFWCLQDDMSRRPYMSQVVQMLEGLCVVPEPPTCSPLGFRLYSSLFQPNPEGVEPSNPNQDSYISAVQLSGPR 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0647 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Lele04g0647 822 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 50 783 - -
Lele04g0647 822 Pfam D-mannose binding lectin 89 172 IPR001480 -
Lele04g0647 822 FunFam Serine/threonine-protein kinase 44 159 - -
Lele04g0647 822 SMART serkin_6 500 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0647 822 Pfam Protein kinase domain 503 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0647 822 ProSiteProfiles Protein kinase domain profile. 500 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0647 822 CDD B_lectin 48 161 IPR001480 -
Lele04g0647 822 MobiDBLite consensus disorder prediction 799 822 - -
Lele04g0647 822 Gene3D - 50 159 IPR036426 -
Lele04g0647 822 SUPERFAMILY Protein kinase-like (PK-like) 482 772 IPR011009 -
Lele04g0647 822 CDD STKc_IRAK 506 774 - -
Lele04g0647 822 Gene3D Transferase(Phosphotransferase) domain 1 575 777 - -
Lele04g0647 822 ProSiteProfiles Bulb-type lectin domain profile. 42 159 IPR001480 -
Lele04g0647 822 ProSitePatterns Protein kinases ATP-binding region signature. 506 529 IPR017441 GO:0005524
Lele04g0647 822 FunFam S-receptor-like kinase 5 575 780 - -
Lele04g0647 822 Gene3D Phosphorylase Kinase; domain 1 471 574 - -
Lele04g0647 822 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 179 IPR036426 -
Lele04g0647 822 PIRSF SRK 10 818 IPR024171 GO:0004674
Lele04g0647 822 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 119 338 IPR011047 -
Lele04g0647 822 FunFam serine/threonine-protein kinase PBS1-like 471 574 - -
Lele04g0647 822 CDD PAN_AP_plant 363 419 - -
Lele04g0647 822 SMART blect_4 48 161 IPR001480 -
Lele04g0647 822 ProSiteProfiles PAN/Apple domain profile. 336 420 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0647 Lele-ChrLele04 3894428 3896896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0647 468 781 Receptor kinase-like Gene Family AT5G20050 44.817 1.16e-89 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele04g0647 Pkinase 2.2e-53 CL0016