Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0642 ATGTTGCATTTGCTGCACGGGACGCTTCATGTGGTCATATATGGGGTCGACAAGCTACATTCTGGACTCAACTTCAGACTCAACAACCAGGGTCCGAGAAACTTTGGGAAGAAAGTTCTTACCCGAGTTAAGAGTGTTTTGCAATTCAAGCCTGAGGTTGGTGGAACTATGATGTATGCAACTGTCGATTTAGATAAAGCAAGAGTTGGGCGAACAAGAATGATACGCCGAGCCTCTAAACCCAAATGGAATGAGACATTTCATATATACTGTGCCCATTCCATTTCTGAGATCATATTCACTCTCAAATATGATAATCCAATTGGAGCAACTCTGATTGGAAGAGCTCACGTACCTGTTGAGCAAGTCCTCAAGGGCAACATAGTAGAAAAATGGGTTGCTATATTGGACGAGGATCGTCGTCCCATACAAGGTGGCTCTAAAGTCCATGTCAGAATGCAGTTCTTCGATGTTACTACGGATGTAACTTGGTCTCAAGGAATCAAGAGCCCCCGAAATGCCGGTGTTCCTCATACGTTCTATACCCAGAAAGTTGGCTGCAAGGTTACTCTGTACCAAGATGCTCATGTCCCAAATGGTTATCATCCTAGGATTCCTTTGTCTGAAGGAAGATATTATGAACATAGTAGATGTTGGGAGGATATTTTCAATGCAATCACAAATGCTAGGCACTTGATTTACATAACTGGGTGGTCTGTTTATACTGAAATAACCTTAGTGAGAGACCCAAGGAGGCCAATTTCTGGTGGAAACATGACACTTGGGGAACATCTCAAGAAGAAAGCTGATGAAGGTGTCAATGTTCTTATGCTTGTGTGGGATGATAGAACTTCTGTTACAGAGCTGAAGAAAGATGGTTTAATGGCCACCCATGATGAAGAAACACACGAGTATTTCAAGAACACAAAAGTGAAGTGTGTGCTGTGTCCACGTAACCCAGATGATGGACGTAGCATAATCCAAGGTTTTGAGATTTCAACAATGTTCACTCATCATCAGAAGACGGTGGTCGTTGACAGTGAAGTTCCTGGTGGAGGATCTCAGAGAAGAAGGATTGTGAGTTTTATTGGTGGGATTGATCTGTGTGATGGAAGATATGACACACAAGAACATCCTCTGTTTTCAACTCTAAACACAATCCATAAGGATGATTTCCATCAGCCAAATTTCCCAGAAGCTTCAATCAAGAAAGGAGGCCCAAGAGAGCCATGGCATGATATTCACTGCAGGTTAGAAGGACCAGCGGCTTGGGATGTCTTGTTCAACTTTCAACAAAGGTGGGAGAAGCAAGTTGGGAAGCAATTCCTACTCCCAACTAGACTTCTTGACCAGATCCTCGTACCTCAATCTTATACGACAACATCGAATGACAGAGATTCATGGACTGTTCAATTGTTCAGATCCATTGATGGGGGTGCAGCCTCTGGCTTCCCTCAAGACCCATCTAAAGCATCTGAATTAGGCCTTGTCAGTGGGAAAGATAACGTCATTGACAGAAGTGTTCAAGATGCTTACATAAATGCCATTAGGCGGGCCAAGAACTTCATCTACATTGAAAACCAGTATTTTCTTGGTAGCTCATATGGTTGGAAAGATTCTGACATAAAAGTTGAAGATATCGGGGCTCTGCATGTTATACCAAAGGAACTATCACTAAAGATTGTGAGCAAGATCGAAGCAGGAGAAAGATTTGCAGTGTACATTGTGATACCAATGTGGCCAGAAGGCATCCCTGAGAGTGGTTCAGTTCAAGCGATATTGGATTGGCAAAGAAGAACAATGGAGATGATGTATACTGATATTGCTGCAGCCATTCAGAGAAAAGGAAACGGATCAGCCCACCCTAGAGATTACTTGACATTTTTCTGCCTCGGAAATCGAGAAAGTAAGAAATCTGGAGAATTTGTTCCTCCAGAGAAACCAGATCCTGATACTGATTACAGCAGAGCACAAAATGCCAGGCGCTTCATGATCTACGTTCATGCCAAGATGATGATAGTTGATGATGAATACATAATCATTGGTTCTGCAAACATAAACCAGAGATCAATGGATGGTGCAAGGGACAGTGAGATTGCAATGGGTGCGTTCCAACCATATCATCTTGCATCGTATGGCCCACCCAAAGGTCAGATATATGGGTTTAGACGAGCTTTATGGTACGAACATCTTGGGGATCCTGATGAAGGTGATCAAGCGTTTGATCATCCTGAAAGTCCATATTGTGTGAAGCTTGTGAATTATCTTTCAGACCAGAACTGGGAAAAGTATTCAAATCAAACATTTGATCCACGAAGTTCATTCAACCACCTCATGCGTTACCCTATAGATATAACCAGAGAAGGAAATGTAACAAAACTACAAGAGTTTGAATTCTTTCCTGATACTAAGGCTTCTGTTCTGGGCTCTAAATCAAGCCTCCCTCCCATCCTCACCACGTAG 2463 0.4263 MLHLLHGTLHVVIYGVDKLHSGLNFRLNNQGPRNFGKKVLTRVKSVLQFKPEVGGTMMYATVDLDKARVGRTRMIRRASKPKWNETFHIYCAHSISEIIFTLKYDNPIGATLIGRAHVPVEQVLKGNIVEKWVAILDEDRRPIQGGSKVHVRMQFFDVTTDVTWSQGIKSPRNAGVPHTFYTQKVGCKVTLYQDAHVPNGYHPRIPLSEGRYYEHSRCWEDIFNAITNARHLIYITGWSVYTEITLVRDPRRPISGGNMTLGEHLKKKADEGVNVLMLVWDDRTSVTELKKDGLMATHDEETHEYFKNTKVKCVLCPRNPDDGRSIIQGFEISTMFTHHQKTVVVDSEVPGGGSQRRRIVSFIGGIDLCDGRYDTQEHPLFSTLNTIHKDDFHQPNFPEASIKKGGPREPWHDIHCRLEGPAAWDVLFNFQQRWEKQVGKQFLLPTRLLDQILVPQSYTTTSNDRDSWTVQLFRSIDGGAASGFPQDPSKASELGLVSGKDNVIDRSVQDAYINAIRRAKNFIYIENQYFLGSSYGWKDSDIKVEDIGALHVIPKELSLKIVSKIEAGERFAVYIVIPMWPEGIPESGSVQAILDWQRRTMEMMYTDIAAAIQRKGNGSAHPRDYLTFFCLGNRESKKSGEFVPPEKPDPDTDYSRAQNARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAFQPYHLASYGPPKGQIYGFRRALWYEHLGDPDEGDQAFDHPESPYCVKLVNYLSDQNWEKYSNQTFDPRSSFNHLMRYPIDITREGNVTKLQEFEFFPDTKASVLGSKSSLPPILTT 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0642 820 Gene3D C2 domain 33 166 IPR035892 -
Lele04g0642 820 SUPERFAMILY Phospholipase D/nuclease 496 737 - -
Lele04g0642 820 FunFam Phospholipase D 475 709 - -
Lele04g0642 820 PANTHER PHOSPHOLIPASE D 3 810 IPR015679 -
Lele04g0642 820 SUPERFAMILY Phospholipase D/nuclease 162 443 - -
Lele04g0642 820 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 334 372 IPR001736 GO:0003824
Lele04g0642 820 SMART C2_3c 8 132 IPR000008 -
Lele04g0642 820 Pfam Phospholipase D C terminal 738 811 IPR024632 -
Lele04g0642 820 FunFam Phospholipase D delta 209 452 - -
Lele04g0642 820 Gene3D Endonuclease Chain A 207 461 - -
Lele04g0642 820 ProSiteProfiles C2 domain profile. 1 133 IPR000008 -
Lele04g0642 820 PIRSF PLD_plant 1 820 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lele04g0642 820 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 663 690 IPR001736 GO:0003824
Lele04g0642 820 CDD C2_plant_PLD 4 156 - -
Lele04g0642 820 Pfam Phospholipase D Active site motif 334 372 IPR001736 GO:0003824
Lele04g0642 820 Pfam Phospholipase D Active site motif 664 690 IPR001736 GO:0003824
Lele04g0642 820 Gene3D Endonuclease Chain A 479 704 - -
Lele04g0642 820 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 48 157 IPR035892 -
Lele04g0642 820 Pfam C2 domain 55 134 IPR000008 -
Lele04g0642 820 SMART pld_4 334 372 IPR001736 GO:0003824
Lele04g0642 820 SMART pld_4 663 690 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0642 Lele-ChrLele04 3865140 3870871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0642 3 820 Phospholipase D Gene Family (Wang group) AT3G15730 66.180 0.0 1118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0623 02 3726860 3732513 Lele04g0642 04 3865140 3870871 hybridization