Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0641 ATGGAGGGTTTGTTACACGGGACGCTTTGGGTAACCATATATGATGTTAATAAGCTGCACAATAGATGTAACTTAGATTTCTGCAACAAGGATGTTCCTCACCGAGGGAAGAGATTTCTAGCCCAAGTCAAGGGTTGTTTGCTGTGTCGACCAGAGCTTGTTGGGACTAGATTGTATGCAACAGTTGATTTAGATAAAGCCAGAGTTGCAAGAACCAGAATGATACGACATCGAACTTCCAACCCCAAGTGGAATGAGACCTTTCGCATATATTGTGCCCACAAGGTTTCAAACATTGTATTCACTGTCAAAGATGGAAACCCCATTGGAGCAACACTAATTGGAAGAGCTTACGTCCCTGTAGATCAAGTCCTGAATGGGGCCCCACTTAACAGACAAGTTGAGATTTATGATGAAGACCTTCGTCCAATACGAGGTGGCTCTAAAATACATGTCAAAATACAATTCGATCATGTGGCCAATGATCCATACTGGTCTAGAGGAATAAAGACTGCAGATTTTCCTGGAGTTCCTCATGTGTTCTTCAACCAGCGAGAAAATTGCAAAGTCACTCTGTACCAAGATGCTCATGTCCTTAATGATTTTATTAGGGTATCTATCCCACTTTCCGGGGCAATCAGATACTATAATCCAGGAAGATGTTGGGAGGACATTTTCAGTGCCATTTATAATGCTAAGTACCTGATTTACATAACTGGTTGGTCTGTTTACACTGAAATAACCTTAACTAGGAACTCTGATAAGCCATCCATGACTCTAGGCGAGCTGCTCTTGAGGAAAGCCGATGAAGGAGTGAAAGTTTTTGTGCTTGTTTGGGATGACAGAACTTCTGATGAACTCAGAAAAGAGGGGTTGATGGCAACCCATGATGAAGAAACAGCACAGTACTTTAGGAATACTAAAGTACAATGTGTGTTGTGCCCCAGAAATCCTGACGTTGGAAGGAGCATAATTCAAGGGCTTCAAACTTCAACCATGTTCACTCACCACCAAAAGGCAGTAGTTGTTGACTGGGACTTATCTGACATTAAACAAGACTCCAATAATGGAGGAACACACAAGAGGACTATTGTAAGTTTTGTAGGCGGAATCGATCTGTGCGATGGACGATATGATACGCATGAGCATCCGTTGTTTTCAACTCTAAACACGATCCATAAAGATGATTTCCATCAGCCAAACTTCCCAGGAGCTTCAATTAAGAAAGGTGGTCCAAGAGAGCCATGGCATGACATTCATTGCAAACTAGAAGGTCCCATTGCTTGGGATGTCTTGTACAATTTTGAGCAGAGATGGGAGAAACAAGTTGGAAAGAACTTCCTTATACCTCTTACTGAACATGATGATGTTCTTGTCTCTCCATCTGAAATAAAACCATTAGAAGACCATGAAACATGGACTGTTCAGTTGTTCAGGTCCATTGATGGTGGGGCAGTTTCTGGGTTTCCTAAAAACCAAGATGAGGCAACCGAGTTAGGCCTTGTTTGTGGGAAAAATAACATCATTGATAGAAGCATTCAGGATGCTTACATAAATGCTATTAGGAGAGCCAAGAATTTCATCTATATTGAAAACCAGTATTTCCTGGGGAGCTCATATGGCTGGAAAGAAACTGATATAAAAGTTTCAGATATTGGGGCTCTGCATCTTATACCAAAGGAGTTGTCACTGAAGATTGTGAGCAAGATTAAAGCAAGAGAAAGGTTTGTCGTGTACATTGTGATCCCAATGTGGCCAGAAGGTGATCCTGAGGGTGCTTCAGTTCAAGCAATATTGGATTGGCAGAGAAGGACAATGGAGATGATGTATACTGATATAGCTGAAGCCATTGAAAAAGTAGGATCCAAAGCCGACCCCACAGAGTATCTCACTTTTTTCTGCCTGGGCAATAGAGAAGTCGAGAAACATGGAGAATATGATCCTCCAGAGAGACCAGTGCCTGATTCTAACTACGATAAAGCACAAAAAGCCAGGCGCTTCATGATTTATGTTCATTCAAAGATGATGATAGTTGATGATGAGTATATAATAGTGGGATCAGCCAACATAAACCAGAGATCAATGGATGGAGGAAGAGACACAGAAATTGCAATGGGGGCATTCCAACCACATCATCTAACAGAGGAAGAGAGTCGACCAAAAGGTCAGATACATGGATTCAGAAGAGCACTATGGCTTGAGCATCTTGGAGATGTGGATGCTGAAGTGTTGGACCGGCCAGAGAGTGAAGAATGTGTGAATCTTGTGAATTTTATTGCTCAAGGGAATTGGGAATTATACACAAAGCAAACATTCAATGAAGATGATTCAATTATGTTTAATCATCTCTTGCGCTACCCCATTGGTATAACCAAAAGTGGGGAAGTAAATGCACTAGAAGGGTTTGAATTCTTTCCTGACACCAAGGCTCGTATTCTGGGCACCAAATCTGAGTACCTTCCTCCTATTCTCACCACCTAG 2481 0.418 MEGLLHGTLWVTIYDVNKLHNRCNLDFCNKDVPHRGKRFLAQVKGCLLCRPELVGTRLYATVDLDKARVARTRMIRHRTSNPKWNETFRIYCAHKVSNIVFTVKDGNPIGATLIGRAYVPVDQVLNGAPLNRQVEIYDEDLRPIRGGSKIHVKIQFDHVANDPYWSRGIKTADFPGVPHVFFNQRENCKVTLYQDAHVLNDFIRVSIPLSGAIRYYNPGRCWEDIFSAIYNAKYLIYITGWSVYTEITLTRNSDKPSMTLGELLLRKADEGVKVFVLVWDDRTSDELRKEGLMATHDEETAQYFRNTKVQCVLCPRNPDVGRSIIQGLQTSTMFTHHQKAVVVDWDLSDIKQDSNNGGTHKRTIVSFVGGIDLCDGRYDTHEHPLFSTLNTIHKDDFHQPNFPGASIKKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWEKQVGKNFLIPLTEHDDVLVSPSEIKPLEDHETWTVQLFRSIDGGAVSGFPKNQDEATELGLVCGKNNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWKETDIKVSDIGALHLIPKELSLKIVSKIKARERFVVYIVIPMWPEGDPEGASVQAILDWQRRTMEMMYTDIAEAIEKVGSKADPTEYLTFFCLGNREVEKHGEYDPPERPVPDSNYDKAQKARRFMIYVHSKMMIVDDEYIIVGSANINQRSMDGGRDTEIAMGAFQPHHLTEEESRPKGQIHGFRRALWLEHLGDVDAEVLDRPESEECVNLVNFIAQGNWELYTKQTFNEDDSIMFNHLLRYPIGITKSGEVNALEGFEFFPDTKARILGTKSEYLPPILTT 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0641 826 PIRSF PLD_plant 1 826 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lele04g0641 826 Gene3D Endonuclease Chain A 211 456 - -
Lele04g0641 826 FunFam Phospholipase D 480 713 - -
Lele04g0641 826 Gene3D C2 domain 7 210 IPR035892 -
Lele04g0641 826 SUPERFAMILY Phospholipase D/nuclease 166 449 - -
Lele04g0641 826 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Lele04g0641 826 Pfam Phospholipase D Active site motif 332 377 IPR001736 GO:0003824
Lele04g0641 826 Pfam Phospholipase D Active site motif 668 694 IPR001736 GO:0003824
Lele04g0641 826 Pfam Phospholipase D C terminal 742 816 IPR024632 -
Lele04g0641 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 156 IPR035892 -
Lele04g0641 826 Gene3D Endonuclease Chain A 483 714 - -
Lele04g0641 826 SUPERFAMILY Phospholipase D/nuclease 513 736 - -
Lele04g0641 826 PANTHER PHOSPHOLIPASE D 4 814 IPR015679 -
Lele04g0641 826 SMART C2_3c 8 133 IPR000008 -
Lele04g0641 826 Pfam C2 domain 37 135 IPR000008 -
Lele04g0641 826 CDD C2_plant_PLD 4 156 - -
Lele04g0641 826 SMART pld_4 667 694 IPR001736 GO:0003824
Lele04g0641 826 SMART pld_4 332 377 IPR001736 GO:0003824
Lele04g0641 826 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 667 694 IPR001736 GO:0003824
Lele04g0641 826 FunFam Phospholipase D delta 212 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0641 Lele-ChrLele04 3861008 3863959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0641 4 826 Phospholipase D Gene Family (Wang group) AT3G15730 62.950 0.0 1065