Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0625 ATGAAACCGGGTCAGGGAATAGTTCAAGATTTCAAAGGGAGAGCTGCGTGTTACAAACAAGATTGGGTTACAGGAATCTGTTCTGGCCTCAAGATATTGGGTCCAACTTTTTACATCTTTTTCGCTTCCGCTTTACCTGTCATCGCCTTCGGAGAGCAGCTTAATAGAGATACAGATGGAGCATTGAGCACGGTTGAAACACTATCATCTACTGCTATTTGTGGAATAATCCACGCGATATTCGGTGGCCAGCCTCTGTTGATTTTGGGGGTTGCTGAACCCACTGCTATAATGTACACTTATTTGTACGAGATCTGCAAAACAAGGCCAGAACTAGGTGCCGACCTGTTTCTGGCTTGGGCTGGTTGGGTTTGTGTTTGGACGGGAATCATGTTGATTCTGCTTGCAGTTTTTAACACTTGCACGATTATCAACAAATTTACAAGAATCGCAGGAGAACTATTTGGCATGTTGATTACTGTTCTTTTCATTCAAGAGGCTATAAAGGGACTGGTAGCCGAGTTCCAAGTGCCTAAGAACGAGAATCCAACGTTGGAGGAATTTCAATTCCAATGGCTGTATACAAATGGCTTACTTGCTATTATTTTCGCTTTCGGGGTACTTATCACTGCCCACAAAAGCAGAACTGCGAGATCATGGCGTTACGGAACAGGGTGGATGCGAGGTTTGATGGCAGATTATGGGGTTCCAGCTGTGGTCTTGCTTTGGTCTGCGCTATCTTATGCGGTACCAGCCAAAGTCCCACACGGTGTTCCCAGAAGGCTGGTTTGTCCCCTTCCTTGGGAAGCCGCGTCTCTGTACCACTGGACAGTAGTCAAGGACATGGCTAAGGTACCAGTGCTTTACATCTTTGCGGCAATTGTTCCTGCCCTGATGGTGGCAGGTTTATACTTCTTCGATCACAATGTAGCTTCCCAGTTGGCTCAACAAAAGGAATTCAACCTTCAAAAACCAGATGCTTACCACCACGATATGTTCCTGCTTGGAATCATGGCTGTGATTTGCGGTCTTCTTGGGCTTCCTCCATCAAATGGTGTCCTTCCACAGTCCCCAATGCATACCAAGAGTTTGGCAGTTCTTAAGAGGCAGTTGATGCGAAAAAAAGTGGTAAAAAAAGCCAAGGAATGCATTCAGGAACAAAGGAGCAACTCTGAAATATACGGAAGGATGCACGATGTGTTCATAGAAATGGACACAGCCCCGACGAAACAAGAGTTGGCGACTTTGAAGGAGGCCGTGATGAAACCTCATGAGAAAGACGGTGTAAAACAAACATTTGATCCTGAGAAACACATTGATGCTTATTTGCCAGTCCGGGTGAACGAGCAAAGAGTAAGCAACTTTTTGCAGTCGTTCCTGGTGGGCGTTTCCGTTTTTGCCATCCCAGTTATTAAAATGATACCTACCTCAGTTCTATGGGGATATTTCGCTTATATGGCCATTGACAGTCTCCCAGGGAATCAATTCTGGGAAAGGATATTGCTTCTCTTTGTCACCCCAAGAAGGCGCCACAAGGTTTTGGAAGGTGATCATGCATCATTCGTTGAATCAGTGCCGTTCAAAACCATAGCTCTCTTCACAGTGATGCAGACTCTGTATTTCCTGTTCTGTTTCGGAGTGACCTGGATACCTATCGGTGGAGTATTGTTTCCATTACCATTCTTCCTTCTCATAGTGATAAGGGAACACGTGCTTCCCAAGATATTCAGCGATGGCGATCTCCAGGAACTGGATTCTTCAGAGTACGATGAAGTTGCCGGTGCCCCTAAGGATCCCACTGATATCCCTGGAGAAACGGATGAGAAATCAGACGATTTCTTCGATGCAGAGTTATTGGATGAGATGACAACCCACAGGGGAGAGATGAAACATAGATTGAGTATCACAAGTGAAGACAAATACTAA 1926 0.4538 MKPGQGIVQDFKGRAACYKQDWVTGICSGLKILGPTFYIFFASALPVIAFGEQLNRDTDGALSTVETLSSTAICGIIHAIFGGQPLLILGVAEPTAIMYTYLYEICKTRPELGADLFLAWAGWVCVWTGIMLILLAVFNTCTIINKFTRIAGELFGMLITVLFIQEAIKGLVAEFQVPKNENPTLEEFQFQWLYTNGLLAIIFAFGVLITAHKSRTARSWRYGTGWMRGLMADYGVPAVVLLWSALSYAVPAKVPHGVPRRLVCPLPWEAASLYHWTVVKDMAKVPVLYIFAAIVPALMVAGLYFFDHNVASQLAQQKEFNLQKPDAYHHDMFLLGIMAVICGLLGLPPSNGVLPQSPMHTKSLAVLKRQLMRKKVVKKAKECIQEQRSNSEIYGRMHDVFIEMDTAPTKQELATLKEAVMKPHEKDGVKQTFDPEKHIDAYLPVRVNEQRVSNFLQSFLVGVSVFAIPVIKMIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPRRRHKVLEGDHASFVESVPFKTIALFTVMQTLYFLFCFGVTWIPIGGVLFPLPFFLLIVIREHVLPKIFSDGDLQELDSSEYDEVAGAPKDPTDIPGETDEKSDDFFDAELLDEMTTHRGEMKHRLSITSEDKY 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0625 641 Pfam HCO3- transporter family 195 388 IPR011531 GO:0006820|GO:0016020
Lele04g0625 641 Pfam HCO3- transporter family 445 535 IPR011531 GO:0006820|GO:0016020
Lele04g0625 641 Pfam HCO3- transporter family 5 177 IPR011531 GO:0006820|GO:0016020
Lele04g0625 641 MobiDBLite consensus disorder prediction 590 609 - -
Lele04g0625 641 PANTHER ANION EXCHANGE PROTEIN 2 593 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lele04g0625 641 Gene3D Helical hairpin bin 14 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0625 Lele-ChrLele04 3781717 3785017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0625 3 640 Antiporters AT4G32510 65.906 0.0 910
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g1483 27 20863181 20867923 Lele04g0625 04 3781717 3785017 CCT
Lele28g0601 28 3854795 3862432 Lele04g0625 04 3781717 3785017 CCT
Lele25g0600 25 3826183 3826820 Lele04g0625 04 3781717 3785017 CCT
Lele26g0615 26 3927601 3932782 Lele04g0625 04 3781717 3785017 CCT
Lele04g0625 04 3781717 3785017 Lele04g0625 04 3781717 3785017 ECH
Lele02g0608 02 3640864 3646103 Lele04g0625 04 3781717 3785017 hybridization