Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0621 ATGTGCAATTTTCACCCATTATCATCCGATCACGGAAGTGGAACTTCCCTCGAACGATCACGGTGGATTACTAACGCAATGTCTAGCTCTGCGATGTTGGGTGATGCGAGCTCGTGGTCTAGGGCACTGGTGAACATCTCTCCTTATACGTTCGCCGCTGTTGGAATCGCCATATCTATCGGCGTCTCTGTCCTCGGTGCCGCATGGGGGATTTATATTACTGGAAGTAGCTTGATCGGTGCCGCAATTAAGGCGCCTCGAATCACCTCCAAGAATCTTATAAGCGTGATCTTCTGTGAAGCTGTTGCTATTTATGGTGTTATTGTGGCTATCATTCTGCAAACCAAATTAGAGAGTGTTCCAAAGGCGAGTATTTATGCGCCTGAGTCTCTTAGAGCTGGATATGCAATTTTTGCCTCTGGAATAATTGTGGGCTTTGCAAATCTTGTTTGCGGGTTATGTGTTGGAATAATTGGAAGTAGCTGTGCATTGTCTGATGCTCAGAACTCCTCACTTTTTGTGAAAATTCTTGTGATTGAGATCTTTGGTAGTGCGCTTGGGCTATTTGGAGTCATTGTGGGAATTATCATGTCAGCTCAAGCAACATGGCCCGCGACAGCTTAG 624 0.4583 MCNFHPLSSDHGSGTSLERSRWITNAMSSSAMLGDASSWSRALVNISPYTFAAVGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPKASIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPATA 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0621 207 FunFam V-type proton ATPase proteolipid subunit 49 204 - -
Lele04g0621 207 Pfam ATP synthase subunit C 138 197 IPR002379 GO:0015078|GO:0033177|GO:1902600
Lele04g0621 207 Pfam ATP synthase subunit C 55 113 IPR002379 GO:0015078|GO:0033177|GO:1902600
Lele04g0621 207 CDD ATP-synt_Vo_c_ATP6F_rpt1 51 113 - -
Lele04g0621 207 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 36 201 - -
Lele04g0621 207 SUPERFAMILY F1F0 ATP synthase subunit C 47 116 IPR035921 -
Lele04g0621 207 CDD ATP-synt_Vo_c_ATP6F_rpt2 133 197 - -
Lele04g0621 207 Gene3D - 49 204 IPR035921 -
Lele04g0621 207 PRINTS Vacuolar ATP synthase 16kDa subunit signature 67 91 IPR000245 GO:0033179|GO:0046961|GO:1902600
Lele04g0621 207 PRINTS Vacuolar ATP synthase 16kDa subunit signature 149 175 IPR000245 GO:0033179|GO:0046961|GO:1902600
Lele04g0621 207 PRINTS Vacuolar ATP synthase 16kDa subunit signature 176 199 IPR000245 GO:0033179|GO:0046961|GO:1902600
Lele04g0621 207 PRINTS Vacuolar ATP synthase 16kDa subunit signature 93 117 IPR000245 GO:0033179|GO:0046961|GO:1902600
Lele04g0621 207 SUPERFAMILY F1F0 ATP synthase subunit C 130 198 IPR035921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0621 Lele-ChrLele04 3762974 3765189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0621 16 204 Primary Pumps ATPases(2) AT2G25610 85.714 6.96e-106 302