Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0614 ATGCCTCCTTCCTCAAGGCCATCCTTTAAACAAGAACAGAAGCGTGCCCATCCAACAAAGTCCAAAAGAGCAGCATCTGATGAGAACAAAGCTTCGGTCGTTACTATGGATGGTCTTCAGAATAAGAGGAGGGCAGTGCTCAGAGATGTAACCAACATCTGTGAAAATTCATATGGTCAAAGTATTGGTGCTTCAAGTTTTCAGGCAAAAGGAGGTAAAAACTCACAGTCAGCTTCAGTGGTATCTACAGAAGTTTCATCAACACAAGAAGACGCTAAAACGAAGTTAGCAATAAGGATGGTAGAATCACGTCAGACCACTGATGCGTTAAAGTTAGAAGACGAAATGCCACCACAACGATGCATGTCCAATGGTATAGGAGATTGTCACTCGGCAGACCCCATGGTTTCAACGCAGGATTCTGTGATGTCTGATGAAGTCCTGACCGCTCCAGATAAAGAAACAGAGAAACTAAGAGCCTCAGATGGCTTGGGCATTGTAGACATTGATTCAGAGTTAAAGGATTCTCAAATTTGGAGTTCATATGCCCCAGATATATACAATAACATACGTGTCACAGAGCTTGAAAGAAGACCATCAACTGATTACATGGAGAAGTTGCAGCAGGATATCAATCCAAGCATGCGGGGAATTCTGATTGATTGGCTTGTGGAGGTTTCTGAGGAATATAAGCTTGTTCCGGATACTCTTTACCTCACTGTAAATCTCATTGACCGGTTTCTCTCTATAAGTTTAACAACGAAACAAAAGCTTCAGCTTGTCGGTGTCGCATGCATGTTGATTGCATCAAAGTACGAAGAGATTTGTGCTCCTCGAGTGGAAGACTTTTGCCTCATCACAGATAATACATACCCGAGAGATGAGGTTCCCTCTATTGAACTGGAATTCCTGGCAAATTATTTAGCAGAGCTTACACTTGTTGAATACAGCTTCCTCAAGTTCCTACCTTCCCTTGTTGCTGCTTCTACTATCTTCCTTGCCAGATGGACGCTCAACCAGTCAGAACCCCCATGGAATCCAACTCTAGAGCATTACACGAGTTACAAAGCCCCAGAACTTAAAGCTAGTGTTCTGGCCCTGGAAGATATACAGCTCAATACCAAGTCATGCTCCCTGAACGCGATACTTCAAGCGCGTGGCAGCATTGTCTGCAAAACCAGTGCTCTCTCTTTTCGAGACGAGAGAGCTCTGAAGAAAGTGGATCACTTCAAAGTTGAATCTCAATCAATTAATGGGACTTGGGGACCTCCCTGTGAAGTGATTGGGTGA 1290 0.438 MPPSSRPSFKQEQKRAHPTKSKRAASDENKASVVTMDGLQNKRRAVLRDVTNICENSYGQSIGASSFQAKGGKNSQSASVVSTEVSSTQEDAKTKLAIRMVESRQTTDALKLEDEMPPQRCMSNGIGDCHSADPMVSTQDSVMSDEVLTAPDKETEKLRASDGLGIVDIDSELKDSQIWSSYAPDIYNNIRVTELERRPSTDYMEKLQQDINPSMRGILIDWLVEVSEEYKLVPDTLYLTVNLIDRFLSISLTTKQKLQLVGVACMLIASKYEEICAPRVEDFCLITDNTYPRDEVPSIELEFLANYLAELTLVEYSFLKFLPSLVAASTIFLARWTLNQSEPPWNPTLEHYTSYKAPELKASVLALEDIQLNTKSCSLNAILQARGSIVCKTSALSFRDERALKKVDHFKVESQSINGTWGPPCEVIG 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0614 429 CDD CYCLIN 215 304 IPR013763 -
Lele04g0614 429 FunFam Mitotic cyclin 6 199 299 - -
Lele04g0614 429 SMART Cyclin_C_2 238 400 IPR004367 -
Lele04g0614 429 SMART cyclin_7 221 305 IPR013763 -
Lele04g0614 429 SMART cyclin_7 306 369 IPR013763 -
Lele04g0614 429 Pfam Cyclin, N-terminal domain 185 305 IPR006671 -
Lele04g0614 429 Gene3D - 199 300 - -
Lele04g0614 429 SUPERFAMILY Cyclin-like 175 304 IPR036915 -
Lele04g0614 429 MobiDBLite consensus disorder prediction 10 27 - -
Lele04g0614 429 ProSitePatterns Cyclins signature. 216 247 IPR006671 -
Lele04g0614 429 Gene3D - 185 198 - -
Lele04g0614 429 Gene3D - 301 382 - -
Lele04g0614 429 CDD CYCLIN 298 355 IPR013763 -
Lele04g0614 429 SUPERFAMILY Cyclin-like 298 383 IPR036915 -
Lele04g0614 429 PANTHER CYCLINS 145 362 IPR039361 -
Lele04g0614 429 MobiDBLite consensus disorder prediction 1 36 - -
Lele04g0614 429 PIRSF Cyclin_A_B_D_E 3 303 IPR039361 -
Lele04g0614 429 PIRSF Cyclin_A_B_D_E 297 407 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0614 Lele-ChrLele04 3708207 3711557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0614 11 382 Core Cell Cycle Gene Families AT1G80370 46.539 2.07e-111 333