Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0611 ATGGGGGTAGATTACTACGATATATTGAAGATTGATAAAAATGCTACAGACGATGATCTGAAGAAGTCATATAGAAAGTTAGCCATGAAATGGCATCCTGACAAGAATCCTAACGACAAAAAAGAAGCTGAAGCCAAATTCAAGCAGATCTCAGAAGCCTATGAGGTACTAAGCGACCCCCAGAAGAGGATGATTTATGACCAGCACGGAGAAGAAGGTTTGAAAGATGTGCCACCGCCAGGGAGTGGACCATCAAGTGGGTTTAATCCCAGAAACGCAGAGGATATTTTTGCAGAATTCTTTGGGAGTAGCCCTTTTGGATTTGGATCATCTGGACCAGGCAAGTCCATGAGGTACCAGTCGGAAGGACCTGGAATATACGGTGGTTTTGGTGGAGGCGACAACATTTTTCGTACATACAGTGAAGGCAAGCAAATGCCAAAAAAGCCACCAGCTGTGGAGAGTAAATTGCCTTGCAGCCTGGAGGAGTTATACTCTGGATCCACAAGGAAAATGAAGATCTCAAGGACTACTGATTCCAATGGACGGCCAGTTACAGAAACACAGATATTGAGCATTGATGTAAAACCCGGGTGGAAGAAAGGTACCAAGATCACTTTCCCAGATAAAGGGAATCAACAATCAAATCAGCTGCCAGCTGACCTTGTGTTTGTGATTGATGAAAAGCCTCATGATCTGTACACGAGAGATGGGAATGACCTGATTGTGAGCCAAAGGGTGTCACTAGCAGAGGCAATAGGAGGAACAACGGTGAACCTCACCACACTTGATGGACGGAGCCTATCAATACCAGTGACTGACATTGTGAGCCCTGGTTATGAGCTTCTTGTTCCAGAGGAAGGAATGCCAATAACAAAGGAGCCTGGGAATAGGGGTGATTTGAAGATCAGATTTGAGGTTAAGTTCCCAACAAGGTTGACGCCAGCGCAACAAGCAGGCCTCAAAAGAGCATTGGAAGGTTGA 984 0.4533 MGVDYYDILKIDKNATDDDLKKSYRKLAMKWHPDKNPNDKKEAEAKFKQISEAYEVLSDPQKRMIYDQHGEEGLKDVPPPGSGPSSGFNPRNAEDIFAEFFGSSPFGFGSSGPGKSMRYQSEGPGIYGGFGGGDNIFRTYSEGKQMPKKPPAVESKLPCSLEELYSGSTRKMKISRTTDSNGRPVTETQILSIDVKPGWKKGTKITFPDKGNQQSNQLPADLVFVIDEKPHDLYTRDGNDLIVSQRVSLAEAIGGTTVNLTTLDGRSLSIPVTDIVSPGYELLVPEEGMPITKEPGNRGDLKIRFEVKFPTRLTPAQQAGLKRALEG 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0611 327 SUPERFAMILY Chaperone J-domain 3 111 IPR036869 -
Lele04g0611 327 MobiDBLite consensus disorder prediction 70 90 - -
Lele04g0611 327 FunFam DNAJ heat shock family protein 230 325 - -
Lele04g0611 327 SUPERFAMILY HSP40/DnaJ peptide-binding domain 234 318 IPR008971 GO:0006457|GO:0051082
Lele04g0611 327 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Lele04g0611 327 Pfam DnaJ C terminal domain 153 310 IPR002939 -
Lele04g0611 327 SUPERFAMILY HSP40/DnaJ peptide-binding domain 154 232 IPR008971 GO:0006457|GO:0051082
Lele04g0611 327 PRINTS DnaJ domain signature 42 62 IPR001623 -
Lele04g0611 327 PRINTS DnaJ domain signature 6 24 IPR001623 -
Lele04g0611 327 PRINTS DnaJ domain signature 62 81 IPR001623 -
Lele04g0611 327 PRINTS DnaJ domain signature 24 39 IPR001623 -
Lele04g0611 327 FunFam Dnaj homolog subfamily b member 148 229 - -
Lele04g0611 327 Pfam DnaJ domain 4 67 IPR001623 -
Lele04g0611 327 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 325 - -
Lele04g0611 327 CDD DnaJ 4 59 IPR001623 -
Lele04g0611 327 Gene3D DnaJ domain 3 111 IPR036869 -
Lele04g0611 327 Gene3D - 231 311 - -
Lele04g0611 327 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Lele04g0611 327 SMART dnaj_3 3 62 IPR001623 -
Lele04g0611 327 CDD DnaJ_C 153 313 - -
Lele04g0611 327 Gene3D - 151 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0611 Lele-ChrLele04 3698892 3700982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0611 5 114 C2H2 Transcription Factor Family AT1G74250 37.391 1.87e-11 63.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0611 04 3698892 3700982 Lele04g0611 04 3698892 3700982 ECH
Lele01g0603 01 3540421 3542561 Lele04g0611 04 3698892 3700982 hybridization
Lele02g0591 02 3552190 3553284 Lele04g0611 04 3698892 3700982 hybridization