Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0589 ATGACCTTGCCTCTCTGTCTTGTCTTTCGAAACTTAGACCAAATTTCTGGGATCAGATCAGTTCAAGATGTCAAAAAACAAAGATTACTTCGCAGTAGCGTACAAGCTCTGAAGGCGCTCAGCTTCCTTCCATATCACCATCCATATATAAACACACAAACACACTCACATAAACCCCCTCAGAATCATTCCATTTCTGTATCTTGTTCACCTTCTCATCTCACCATGCCGGCCGGCGACAAGGGCATCTCTCTCGACGAGATAAAAAATGAGAACGTCGATTTGGAAAAAATTCCCATAGAGGAAGTGTTTGAGCAGCTGAAATGTTCAAGACCAGGTCTATCGTCAGACGAAGGAGCCAATCGGCTCCAGGTGTTCGGACCCAACAAATTGGAAGAGAAAAAGGAAAGCAAATTTTTGAAGTTCTTGGGTTTCATGTGGAACCCTCTATCATGGGTCATGGAAGCTGCTGCAATAATGGCCATTGCTTTGGCCAATGGAGGAGGAAGACCTCCAGATTGGCAAGACTTCGTCGGTATCATTGTTCTACTGCTCGTCAACTCTACCATCAGTTTTATCGAAGAAAACAATGCTGGAAATGCTGCTGCAGCACTTATGGCTGGTTTAGCTCCCAAGACCAAGGTTCTGAGAGATGGTCGATGGAGTGAACAAGATGCTGCAATTTTAGTCCCAGGAGATATAATCAGCATCAAACTAGGAGATATTATCCCTGCTGATGCACGTCTTCTGGAGGGTGATCCTCTAAGTGTTGATCAGTCTGCTTTAACTGGAGAGTCTCTTCCTGTAACCAAAAGCTCCTCGGATGAAGTATTTTCTGGATCAACTGTTAAAAAGGGAGAGATTGAAGCAGTTGTGATTGCCACTGGTGTCCACACCTTCTTTGGTAAAGCTGCTCATTTGGTGGATAGCACCAACCAAGTTGGTCATTTCCAGAAAGTCCTCACAGCCATTGGTAACTTCTGTATTTGTTCAATTGCTGTTGGGATAGTGATTGAGATCATAGTGATGTACCCAATACAGCATCGCAAGTACAGGGATGGAATCGACAACCTTTTGGTTCTGTTGATCGGAGGAATCCCAATTGCCATGCCTACCGTCTTGTCGGTGACTATGGCTATCGGTTCTCATAGGTTGTCTCAACAAGGTGCAATCACCAAGAGAATGACTGCTATTGAGGAAATGGCAGGAATGGATGTTCTGTGCAGTGACAAGACTGGGACTCTCACGTTGAATAAGCTAAGTGTTGACAGGAACTTGATTGAGGTGTTTGCTAAGGGTGTGGAGAAGGAGTTTGTGATCCTTCTTGCAGCAAGGGCCTCCAGAACTGAGAATCAGGATGCCATAGATGCTGCAATTGTTGGGATGTTAGCTGATCCGAAGGAGGCTCGAGCCGGAATCAGGGAGGTCCATTTTCTGCCATTTAATCCCGTGGACAAGAGGACTGCTCTCACATACATTGATTCTGACGGAAGTTGGCACAGGGCTAGTAAAGGTGCTCCCGAGCAGATTTTGAACCTTTGCAACAGCAAAGAGGATGTAAGGAAGAGGGTCCATTCATGTATCGATAAGTTTGCTGAGCGGGGACTTCGTTCTTTAGGTGTTGCAAGACAGCAAGTGCCAGAAAAGTCAAAAGATGCTCCAGGGGCACCCTGGCAACTTGTTGGTTTGCTACCTCTGTTTGATCCTCCTAGGCATGACAGTGCTGAGACCATCAGAAGAGCTCTTCACCTTGGTGTCAATGTTAAGATGATTACTGGTGATCAGCTTGCCATTGCGAAGGAAACTGGGAGAAGGCTTGGTATGGGAACAAACATGTACCCATCTTCTTCGTTGCTTGGAGGAGACAAGGATGCTACTGTTTCAGCTCTTCCAGTTGACGAATTGATTGAGAAGGCTGATGGATTTGCAGGAGTCTTTCCTGAGCACAAGTATGAGATAGTGAAAAGATTGCAAGAGAGGAAGCATATATGTGGAATGACAGGAGATGGTGTGAATGATGCACCTGCATTGAAGAGAGCAGATATTGGAATAGCCGTTGCTGATGCCACGGATGCTGCTAGGGGTGCTTCTGACATTGTCCTCACTGAACCTGGTTTGAGTGTCATTGTCAGTGCAGTGCTCACCAGCAGGGCTATTTTCCAGAGGATGAAGAACTACACTATTTATGCTGTGTCTATCACTATTCGTATCGTGTTTGGTTTCCTGTTTATTGCGTTGATCTGGAAGTTTGATTTTGCACCCTTCATGGTTCTGATTATTGCCATACTAAATGACGGAACCATTATGACAATATCCAAGGATCGAGTGAAGCCATCCCCACAGCCCGACAGTTGGAAACTGAAGGAGATATTTGCTACCGGCGTTGTGCTTGGAGGTTACTTGGCACTAATGACAGTTGTATTTTTCTGGGCTATATACGATACTGGCTTCTTCTCGGACAAGTTTGGAGTGAGGTCTCTGAGAGACAGACCTGATGAAATGATGGCAGCCTTGTACCTACAAGTCAGTATTATAAGCCAGGCCCTAATTTTTGTCACTAGGTCTCGGAGCTGGTCCTATGTTGAAAGGCCTGGTCTCCTCCTTCTCGGTGCTTTCTTAATTGCTCAGCTGATAGCAACTTTGATTGCCGTATATGCACATTGGGGGTTCGCAAGGATTAAGGGAATGGGATGGGGATGGGCTGGTGTAATCTGGCTCTACAGTATAGTGACATATATCCCTCTTGATTTGCTCAAATTTGGTATCCGCTACGGTCTCAGTGGCAAGGCTTGGGATAATCTTTTGGAGAACAAGACTGCCTTCACTACCAAGAAAGATTATGGAAAAGAAGAGAGGGAAGCACAGTGGGCAGCTGCACAGAGAACTCTTCATGGTCTTCAGCCACCAGAAACTACAAACCTTTTCAATGACAAAAATAGCTACAGGGAGCTTTCAGAGATTGCAGAGCAAGCCAAGCGACGAGCTGAGGTTGCAAGGCTAAGGGAGCTTCACACTCTAAAGGGACACGTTGAATCAGTGGTGAAGCTGAAGGGACTTGACATTGATACAATTCAGCAGCATTATACAGTGTAA 3093 0.4559 MTLPLCLVFRNLDQISGIRSVQDVKKQRLLRSSVQALKALSFLPYHHPYINTQTHSHKPPQNHSISVSCSPSHLTMPAGDKGISLDEIKNENVDLEKIPIEEVFEQLKCSRPGLSSDEGANRLQVFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIVLLLVNSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLSVDQSALTGESLPVTKSSSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVIEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEKEFVILLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGSWHRASKGAPEQILNLCNSKEDVRKRVHSCIDKFAERGLRSLGVARQQVPEKSKDAPGAPWQLVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGGDKDATVSALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGGYLALMTVVFFWAIYDTGFFSDKFGVRSLRDRPDEMMAALYLQVSIISQALIFVTRSRSWSYVERPGLLLLGAFLIAQLIATLIAVYAHWGFARIKGMGWGWAGVIWLYSIVTYIPLDLLKFGIRYGLSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETTNLFNDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0589 1030 Gene3D - 173 894 - -
Lele04g0589 1030 Gene3D - 979 1030 - -
Lele04g0589 1030 CDD P-type_ATPase_H 113 920 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lele04g0589 1030 FunFam ATPase 4 plasma membrane-type 652 894 - -
Lele04g0589 1030 SUPERFAMILY HAD-like 404 714 IPR036412 -
Lele04g0589 1030 Gene3D - 420 567 IPR023299 GO:0000166
Lele04g0589 1030 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 113 885 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lele04g0589 1030 FunFam Plasma membrane ATPase 211 295 - -
Lele04g0589 1030 PRINTS P-type cation-transporting ATPase superfamily signature 258 272 - -
Lele04g0589 1030 PRINTS P-type cation-transporting ATPase superfamily signature 690 702 - -
Lele04g0589 1030 PRINTS P-type cation-transporting ATPase superfamily signature 667 686 - -
Lele04g0589 1030 PRINTS P-type cation-transporting ATPase superfamily signature 584 594 - -
Lele04g0589 1030 PRINTS P-type cation-transporting ATPase superfamily signature 408 422 - -
Lele04g0589 1030 PRINTS P-type cation-transporting ATPase superfamily signature 562 573 - -
Lele04g0589 1030 PRINTS H+-transporting ATPase (proton pump) signature 524 542 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele04g0589 1030 PRINTS H+-transporting ATPase (proton pump) signature 639 655 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele04g0589 1030 PRINTS H+-transporting ATPase (proton pump) signature 839 860 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele04g0589 1030 PRINTS H+-transporting ATPase (proton pump) signature 698 723 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele04g0589 1030 PRINTS H+-transporting ATPase (proton pump) signature 667 683 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele04g0589 1030 SFLD p-type atpase 390 719 IPR044492 -
Lele04g0589 1030 Gene3D - 211 295 - -
Lele04g0589 1030 SFLD C1.7: P-type atpase like 390 719 - -
Lele04g0589 1030 SMART Cation_ATPase_N_a_2 94 166 IPR004014 -
Lele04g0589 1030 Pfam E1-E2 ATPase 210 387 - -
Lele04g0589 1030 Pfam haloacid dehalogenase-like hydrolase 404 681 - -
Lele04g0589 1030 Pfam Cation transporter/ATPase, N-terminus 97 160 IPR004014 -
Lele04g0589 1030 SUPERFAMILY Calcium ATPase, transduction domain A 211 308 IPR008250 -
Lele04g0589 1030 ProSitePatterns E1-E2 ATPases phosphorylation site. 410 416 IPR018303 -
Lele04g0589 1030 Coils Coil 981 1001 - -
Lele04g0589 1030 SUPERFAMILY Calcium ATPase, transmembrane domain M 93 924 IPR023298 -
Lele04g0589 1030 PANTHER CALCIUM-TRANSPORTING ATPASE 96 962 - -
Lele04g0589 1030 FunFam Plasma membrane ATPase 420 567 - -
Lele04g0589 1030 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 639 757 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele04g0589 1030 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 180 424 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele04g0589 1030 Gene3D - 405 704 IPR023214 -
Lele04g0589 1030 FunFam Plasma membrane ATPase 560 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0589 Lele-ChrLele04 3554933 3564256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0589 83 1030 Primary Pumps ATPases AT2G07560 84.283 0.0 1631