Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0581 ATGGCCGTGGAGCTCATGGGGTTCCCTGGAATCGACGAGCAGAAGGCAATCCAGGAGGCTGCATCGGAAGGCCTCAAGGGTATGGAGCATCTGATCCGTCTTCTCTCTCACCAACCCAATCGTTTGGACTGCACCGACGTCACCGGCGTCACCGTTTCCAAGTTCAAAAAGCTCATCTCCCTCCTCAACAGGACTGGTCACGCCCGGTTCAGGCGAGCTCCCATTCCTTCATCCTCGTCTTCTTTTGCCTCGCCGCAGCCGCCGTCCTCCGCCTCGATTTCTCGAATGCATTCATTCAGTCTATCTCCGTCGCAGTTTCCCTCTCCGGCTAGCGTGTCTCCGAGTCCCGTTGTAAATCAGGCCCCGGTGCAGCACTTGCCTTCTGGTTTCGTTCCATCTCAGGCGCCGCAGAGTTTGACTCTTGATTTTACAAAGCCTAACATCGTAAGCTCTAAGACTAAACCCTTAGAGCTGGAGTTCTCGAAGGAAACCTTTAGCGTTTCGTCCAACTCGTCGTTTATGTCGTCCGCCATTACTGGAGACGGCAGCGTTTCGAACGGAAAACAAGGTTCGACTCTCTTGTTGACTCAGGCGGCACCGACGGTTTCTGGTGGAAAACTACCTCTTTCCTCGGGGCCGTTCAAGAAAAGATGTCACGGCCACCGTGACCACTCCGACGACGCATCGGGCTCCGGGAAATGTCACTGCGTAAAGAGAAGGAAAAATCGGGTGAAGAAGACGGTGAGGGTGCCGGCGATAAGTTCAAAGATAGCGGACATTCCGCCGGACGAGTACTCGTGGAGGAAGTACGGTCAGAAGCCGATCAAGGGATCACCATACCCACGAGGTTACTACAAGTGCAGCACAGTAAGAGGGTGTCCGGCGAGGAAGCACGTGGAACGAGCGACCGATGATCCGGCGATGTTGATCGTGACGTACGAGGGGGAGCACCGACATGTGATTCAGGGTGCGATGCAGGAGAACATGGCCGGGAATGTGGGTTTGGTGTTCGAGTCAACGTGA 1023 0.5513 MAVELMGFPGIDEQKAIQEAASEGLKGMEHLIRLLSHQPNRLDCTDVTGVTVSKFKKLISLLNRTGHARFRRAPIPSSSSSFASPQPPSSASISRMHSFSLSPSQFPSPASVSPSPVVNQAPVQHLPSGFVPSQAPQSLTLDFTKPNIVSSKTKPLELEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGSTLLLTQAAPTVSGGKLPLSSGPFKKRCHGHRDHSDDASGSGKCHCVKRRKNRVKKTVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERATDDPAMLIVTYEGEHRHVIQGAMQENMAGNVGLVFEST 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0581 340 ProSiteProfiles WRKY domain profile. 256 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g0581 340 MobiDBLite consensus disorder prediction 72 97 - -
Lele04g0581 340 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 321 IPR044810 GO:0003700
Lele04g0581 340 FunFam WRKY transcription factor 65 245 322 - -
Lele04g0581 340 MobiDBLite consensus disorder prediction 74 97 - -
Lele04g0581 340 Gene3D WRKY domain 246 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele04g0581 340 SUPERFAMILY WRKY DNA-binding domain 259 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele04g0581 340 Pfam Plant zinc cluster domain 215 259 IPR018872 -
Lele04g0581 340 Pfam WRKY DNA -binding domain 263 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g0581 340 SMART WRKY_cls 261 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0581 Lele-ChrLele04 3520131 3521723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0581 1 339 WRKY Transcription Factor Family AT2G24570 58.405 9.34e-115 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele04g0581 WRKY 9.1e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0581 04 3520131 3521723 Lele04g0581 04 3520131 3521723 ECH
Lele01g0568 01 3361393 3362993 Lele04g0581 04 3520131 3521723 hybridization
Lele02g0562 02 3382519 3384119 Lele04g0581 04 3520131 3521723 hybridization