Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0574 ATGCTTCAAGTCAAACCCATTTTTCTAGTAAATGGAATTTGTTTTTATCATGTTTTTCTACACCCGTCGTTTCATGGCAGGGAGTCGTCTACTGTCTTGTACAATTATTTTGTATTTCTCATTCATTCATTGCTAAATGATTACTTTTACCTCAGCATTCCTTTGCTGGCGCGTCTGCAGGCATTGATCGGGAGTGACGCTGTAAAAAATGAGAAGCTACTTAGGTTTTACGATGATGGTAAACAGAAACTGGAGCTTTCTTTGGAAAAGCCATTGTCAGTATACATGGTACACGCAGCCGTAAACTCTGAAGGCAAGATTGTGAGTGGTGATAAGAACAAAATTAACCTAAAAATTCCTTCTCTCGGAAAGTTTAAGGTATTCCCAGAAAACCATGAACCATGGAAGAAGAGAATCCTTGATCCTGGAAGTGACATATATTTGCAGTGGAACCGGGTTTTCCTCTGTTCTTGTATTCTGGCTCTATTTGTTGACCCACTGTTTTTCTACCTTCCCTCGGTGGCAAATGATGAAAAGTCAGCGTGTTTGGTTACTGATTTGAACATTGGAATTGTAGTGACATGTTTCCGAACATTGGCTGATATTTTCTATATTCTTAACATGCTCATAAAGTTCAGAACAGCTTACGTATCACCAAGTTCCAGGGTTTTTGGAAGGGGCGAGTTAGTCATGGATGCAAGTTTGATTGCAACACGTTATCTAAGGTCAAAATTCTTCATAGATCTTGTGGCTACACTACCTCTTCCTCAGATCATGATTTGGTTTATTATGCCTGCAATTAGAAGCTCCCATGCTGATCAAACCAACAATGCTCTTGTTCTGATTGTTCTGCTTCAATATATTCCCAGATTATATTTGATTTTCCCCTTAAGTTCTCAGATTATCAAAGCCACTGGTGTAGTCACGAAGACAGCTTGGGCTGGAGCAGCTTATAACCTTTTACTTTACATGTTGGCTAGCCATGTGTTGGGGGCATCATGGTACTTGTTGTCAATTGAAAGGAATGCTACATGTTGGAAATCACAATGCAAGAATGAAACTTTCCCCATGAAATGTGTTCTTCAATACTTAGATTGCAACAGTTTAAATGATGACGATCGCATGAAGTGGGTAAACACTACTTCTGTGTTTGATAACTGCAATCCAAATAATGACATGAGTTTCAAGTATGGCATTTTTGGACCTGCTGTTGAAAACAATGTTGTTTCCTCACAGTTTGTAGAGAAGTATCTCTATTGTCTATGGTGGGGCTTGCAAAACTTGAGTTCCTATGGCCAGAATCTGAGCACAAGCACATTCATTGGGGAAACTACATTTGCCATACTTATAGCTATCCTGGGTCTAGTTTTGTTTGCCCACTTAATTGGAAACATGCAGACATATCTGCAATCTATCACTGTGAGGCTTGAGGAATGGAGGCTGAAGCGACGTGATACTGAAGAATGGATGAGACACCGTCAACTGCCCCAAAATCTAAGAGAACGTGTTCGAAGATTTGTTCGATACAAGTGGGTTGCAACTCGAGGAGTTGATGAAGAAACCATCTTGCGAGGCCTTCCCATAGACCTGCGTAGAGATATCCAACGGCACCTTTGCTTAGACCTTGTTCGACGTGTCCCTTTTTTCTCACAAATGGATGATCAGTTACTCGATGCAATATGTGAGAGATTGGTTTCATGCTTGAGTACTCAAGGCACTTACATTGTGCGAGAAGGAGATCCAGTTACAGAGATGCTTTTCATCATAAGAGGAAGACTTGAAAGCTCAACTACAAATGGAGGAAGAACAGGTTTCTTCAACTGTAATGTACTGAAACCAGGTGATTTCTGTGGAGAAGAGCTTCTAGCATGGGCTTTGCTTCCAAAATCTACTTCCAATTTACCTTCTTCTACAAGAACAGTGAAAGCCCTTGTGGAAGTTGAAGCCTTTGCACTAAGAGCTGAGGATCTTAAGTTTGTTGCGAATCAGTTTCGCCGTCTTCACAGCAAAAAGCTGCAGCATACCTTCCGTTTCCACTCTTACCACTGGAGGACATGGGCAGCATGCTTCATTCAAGCTGCTTGGAGAAGGTACACGAAGAGGAAGCTCGCGGCGAGCCTTAGTTTGAAGGAATGTCACTCATTTGCTTATGAGGAGGAGAAGCCCATTGCTGTTGTGACTTCAACTTCGAGTGCAAATTCATTGGGTGTGACTATACTTGCCTCAAGATTTTCTGCAAACACAAGGAGAGGAGCTCAGAAGATTAAAGATCTTAAGATGCCTAAGTTGCAGAAGCCTCAAGATCCTGACTTCTCAGTGGAAGCAGAGGATGATTAG 2337 0.4146 MLQVKPIFLVNGICFYHVFLHPSFHGRESSTVLYNYFVFLIHSLLNDYFYLSIPLLARLQALIGSDAVKNEKLLRFYDDGKQKLELSLEKPLSVYMVHAAVNSEGKIVSGDKNKINLKIPSLGKFKVFPENHEPWKKRILDPGSDIYLQWNRVFLCSCILALFVDPLFFYLPSVANDEKSACLVTDLNIGIVVTCFRTLADIFYILNMLIKFRTAYVSPSSRVFGRGELVMDASLIATRYLRSKFFIDLVATLPLPQIMIWFIMPAIRSSHADQTNNALVLIVLLQYIPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGASWYLLSIERNATCWKSQCKNETFPMKCVLQYLDCNSLNDDDRMKWVNTTSVFDNCNPNNDMSFKYGIFGPAVENNVVSSQFVEKYLYCLWWGLQNLSSYGQNLSTSTFIGETTFAILIAILGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTEEWMRHRQLPQNLRERVRRFVRYKWVATRGVDEETILRGLPIDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSCLSTQGTYIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNCNVLKPGDFCGEELLAWALLPKSTSNLPSSTRTVKALVEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFHSYHWRTWAACFIQAAWRRYTKRKLAASLSLKECHSFAYEEEKPIAVVTSTSSANSLGVTILASRFSANTRRGAQKIKDLKMPKLQKPQDPDFSVEAEDD 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0574 778 MobiDBLite consensus disorder prediction 755 778 - -
Lele04g0574 778 Gene3D Helix hairpin bin 476 539 - -
Lele04g0574 778 FunFam Cyclic nucleotide-gated ion channel 1 475 539 - -
Lele04g0574 778 Pfam Cyclic nucleotide-binding domain 571 659 IPR000595 -
Lele04g0574 778 FunFam Cyclic nucleotide-gated ion channel 1 546 664 - -
Lele04g0574 778 SUPERFAMILY cAMP-binding domain-like 478 670 IPR018490 -
Lele04g0574 778 Pfam Ion transport protein 150 475 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele04g0574 778 SUPERFAMILY Voltage-gated potassium channels 142 470 - -
Lele04g0574 778 SMART cnmp_10 548 679 IPR000595 -
Lele04g0574 778 Gene3D Jelly Rolls 546 666 IPR014710 -
Lele04g0574 778 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 131 771 - -
Lele04g0574 778 ProSiteProfiles cAMP/cGMP binding motif profile. 548 632 IPR000595 -
Lele04g0574 778 Gene3D - 154 474 - -
Lele04g0574 778 CDD CAP_ED 548 679 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0574 Lele-ChrLele04 3482962 3488167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0574 75 774 Ion Channels AT2G24610 69.263 0.0 1028