Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0567 ATGGATCCAAAGAAATCTAACAAGATCAGAGATATTGTTAGGCTCCAACAGATCCTCAAGAAATGGAGAAAGCAAGCCAGCTCTTCAAAAACCAGTGGTTGTAACAGCAGTGGCGGCAGCACTAGCAGTAAAAGCATCAAGTTTCTGAAGAGGACACTTTCTATGTCCGAACGAGAAGGGGCATCAAGCAATGTTGTTCCAAAAGGCTATCTCGCTGTTTGCGTTGGGGAAGAGCTGAAGAGGTTCATTATACCTACTGAATATCTGAGCCATCATGCATTTCATGTGTTACTGAGAGAAGCAGAAGAAGAATTCGGGTTTCAACAGACTGGTGTTCTGAGAATCCCTTGTGAAGTGCCAGTTTTTGAGAGTATCTTGAAGATGGTGCAGGGAAAGAAGGACCAATCTAGCACTCAAGAATGCAGACTTAAAGTTGAAGAAGTATTGGGACACTGCTCATTAGAACACCAGCTTGCTTACTCTCACCATCCCCAGAGTCCAATGTGCAGATAA 513 0.4366 MDPKKSNKIRDIVRLQQILKKWRKQASSSKTSGCNSSGGSTSSKSIKFLKRTLSMSEREGASSNVVPKGYLAVCVGEELKRFIIPTEYLSHHAFHVLLREAEEEFGFQQTGVLRIPCEVPVFESILKMVQGKKDQSSTQECRLKVEEVLGHCSLEHQLAYSHHPQSPMCR 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0567 170 MobiDBLite consensus disorder prediction 23 43 - -
Lele04g0567 170 Pfam Auxin responsive protein 20 129 IPR003676 GO:0009733
Lele04g0567 170 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 125 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0567 Lele-ChrLele04 3441613 3442125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0567 1 170 Calmodulin-binding Proteins AT2G24400 55.208 1.23e-58 179
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0567 04 3441613 3442125 Lele04g0567 04 3441613 3442125 ECH
Lele01g0554 01 3292724 3293263 Lele04g0567 04 3441613 3442125 hybridization
Lele02g0549 02 3305272 3305775 Lele04g0567 04 3441613 3442125 hybridization