Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0564 ATGGAGACGAAGCCGGCCGCCATCTTGCCAGCCTGCACCGCTACTCAACCCCAATCTCCGCAAGCGTCATCGGTTCTCTCCGGCGTCTGCAACATGAAACGGACGCCGTCCGAGTTGGCCCTGGAAGAGTTCCTGAATAAGACGGTCGCATCGACCAACGACGAGGACGTGAAACCGTACGAGCTTTGGGGTCAAAGAGACAAAAGTTTCCCCCACGCGGACGCATTTCTCGCCGGCGTCGGCTCCGACGATTTCGATCACGCTTTCCGAAACTCGGATGCGGTGACTGCGTTTTCAACTTGTGAGGAACTAACAGATTCCCTTTTATGGCCCCAGAAGCCTTCACCTCTCTCTGCTACGCTTGAATCTCAGTCATCCATTTGTGGTACTGCTGTTTGCAGCCCTGTGTCAGCTAATAATCAACCAACCCTCGGAGATAATAATCAAGCCAAAGGAACCACCACAAGTGCTTCTTCCTCCCGTGAGCAATCTGATGAGGATGACGTAGCGGGCCCTTGTGATCAGAGCACAAACCCCAATGATATGAAGCGCCTCAGAAGGAAGGTTTCTAATAGGGAATCTGCAAGGAGATCCAGAAGAAGAAAACAAGCACATCTGGCTGATCTTGAGTTGCAGGTTGAGCAACTGAGATTGGAGAATGCAGCTCTCTACAAGCAGCTTACAGATGCCGGTCAGCAATTTCGCGAGGCTAATACAAATAACCGAGTGCTAAAATCGGATGTCGAAGCTTTGAGAGCCAAGGTGAAGTTAGCTGAAGATATGGTGACTAGGGGCTCGTTCTCCACCTTAAATAATCCGCTTGTTCAGAATCAGAGTCATCAGCTAAACGCGCCACCGCAACTCAACACCACTAGCCTGCAGCGTTGCATGGCCCATGTCTCACCGATGATCACTGTCCATGGAATTGATGCTTCATATGCTGCTGTTGCAGTTGATGATCACAATTCATCTCTTGGTCTTGCAAACTTAGATATCGGCAACAGCAATTTCAACACTGGAGTTATTAGTGATGCGATGAGATGTATCAATGAAATATATCGTTGA 1065 0.4948 METKPAAILPACTATQPQSPQASSVLSGVCNMKRTPSELALEEFLNKTVASTNDEDVKPYELWGQRDKSFPHADAFLAGVGSDDFDHAFRNSDAVTAFSTCEELTDSLLWPQKPSPLSATLESQSSICGTAVCSPVSANNQPTLGDNNQAKGTTTSASSSREQSDEDDVAGPCDQSTNPNDMKRLRRKVSNRESARRSRRRKQAHLADLELQVEQLRLENAALYKQLTDAGQQFREANTNNRVLKSDVEALRAKVKLAEDMVTRGSFSTLNNPLVQNQSHQLNAPPQLNTTSLQRCMAHVSPMITVHGIDASYAAVAVDDHNSSLGLANLDIGNSNFNTGVISDAMRCINEIYR 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0564 354 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 244 IPR004827 GO:0003700|GO:0006355
Lele04g0564 354 MobiDBLite consensus disorder prediction 139 160 - -
Lele04g0564 354 Gene3D - 182 238 - -
Lele04g0564 354 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700|GO:0006355
Lele04g0564 354 PANTHER BASIC LEUCINE ZIPPER 63 16 335 - -
Lele04g0564 354 SUPERFAMILY Leucine zipper domain 183 231 IPR046347 GO:0003700|GO:0006355
Lele04g0564 354 MobiDBLite consensus disorder prediction 139 203 - -
Lele04g0564 354 Pfam bZIP transcription factor 182 228 IPR004827 GO:0003700|GO:0006355
Lele04g0564 354 Coils Coil 192 261 - -
Lele04g0564 354 FunFam BZIP transcription factor 181 232 - -
Lele04g0564 354 SMART brlzneu 179 243 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0564 Lele-ChrLele04 3424464 3427561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0564 32 353 bZIP Transcription Factor Family AT5G24800 40.923 8.39e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele04g0564 bZIP_1 3e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0564 04 3424464 3427561 Lele04g0564 04 3424464 3427561 ECH
Lele01g0551 01 3275569 3278697 Lele04g0564 04 3424464 3427561 hybridization
Lele02g0546 02 3289147 3292267 Lele04g0564 04 3424464 3427561 hybridization