Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0556 ATGGGAGCGACGGAAATGAAAAATATGGAAAGGGAACGAACCCGGAAACGGCCTCGTCTAACGTGGGACGATGCCCCATCTTCTGAGACCGAGGCGCAAAGGGCTCTTGTGGTGGGTGATGGAGTCTTTCAAAATAGGCATGCATCGCCTCCAAGAAGGGAAGACGATCGTGAAGGCCATTACGTGTTTAATCTTGGCGAAAATCTCACTCCTAGATATAAAATCCTCAGCAAAATGGGTGAAGGCACATTTGGTCGAGTTCTGGAATGTTGGGACCGCCAAACACGAGAATATGTGGCCATCAAAGTAGTTAGAAGCATACCAAAGTACCGTGATGCAGCAATGATTGAGGTTGATGTGCTTCAACGTCTAGTCAAGAATGAGAGAGGCAGTTCACGTTGTGTACATATTCGGAACTGGTTTGATTATCGGAATCATATATGTATTGTATTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTTAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGGGAATCTGGACGACAGCTTTTGGAATCTGTAGCATATATGCATGACCTACGCTTAATCCACACTGACCTGAAGCCAGAAAATATACTTCTGGTTTCTTCTGATTTCGTACAGATCCCTAGCTGTAAGAGGGTTTTCTCAGACGAGATGCAATTCAGGTGCTTGCCCAAGTCTAGTGCTATTAAGCTGATTGATTTTGGTAGTACCGCATTTGATAACCAGAATCATAGCTCCATTGTTTCTACAAGGCATTACCGAGCCCCTGAGATTATTCTAGGTCTAGGGTGGTCATACCCATGTGATTTGTGGAGCGTCGGATGTATTATCGTTGAACTAATTTCGGGCAAAGCACTGTTTCAGACTCACGAAAACTTAGAGCACTTGGCAATGATGGAGAGAGTGCTGGGGCCTCTCCCTGAGCATATGGCTCAAAGGTCTAACAGAGGTGCTGAAAAGTATTTTAGGCACGGGACACGACTAAATTGGCCTGAAGGGGCTGTTTCAAGGGAGAGTATTCGAGCAGTGAGGAAGCTTGATCATCTTAAGGAACTTGTAGCACGTCAAGTGGACTCCTCAAGATCCTCTTTAACTGACCTGTTGCATGGATTACTGGCCTATGATCCGTCTGACCGTCTAACAGCTCGCCTAGCCCTTGATCATCCCTTCTTTACCAATCCTACTTGA 1209 0.4524 MGATEMKNMERERTRKRPRLTWDDAPSSETEAQRALVVGDGVFQNRHASPPRREDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTREYVAIKVVRSIPKYRDAAMIEVDVLQRLVKNERGSSRCVHIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVRESGRQLLESVAYMHDLRLIHTDLKPENILLVSSDFVQIPSCKRVFSDEMQFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEIILGLGWSYPCDLWSVGCIIVELISGKALFQTHENLEHLAMMERVLGPLPEHMAQRSNRGAEKYFRHGTRLNWPEGAVSRESIRAVRKLDHLKELVARQVDSSRSSLTDLLHGLLAYDPSDRLTARLALDHPFFTNPT 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0556 402 MobiDBLite consensus disorder prediction 1 30 - -
Lele04g0556 402 FunFam Serine/threonine-protein kinase AFC2 60 153 - -
Lele04g0556 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Lele04g0556 402 Gene3D Transferase(Phosphotransferase) domain 1 127 398 - -
Lele04g0556 402 SUPERFAMILY Protein kinase-like (PK-like) 60 400 IPR011009 -
Lele04g0556 402 SMART serkin_6 73 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0556 402 Gene3D Phosphorylase Kinase; domain 1 60 153 - -
Lele04g0556 402 ProSiteProfiles Protein kinase domain profile. 73 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0556 402 MobiDBLite consensus disorder prediction 1 24 - -
Lele04g0556 402 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 13 400 - -
Lele04g0556 402 FunFam Serine/threonine-protein kinase AFC2 149 398 - -
Lele04g0556 402 Pfam Protein kinase domain 73 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0556 402 CDD PKc_CLK 60 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0556 Lele-ChrLele04 3383690 3387387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0556 73 400 Core Cell Cycle Gene Families AT1G76540 25.872 9.00e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Lele04g0556 Pkinase 4.1e-50 CL0016