Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0550 ATGGAGTATTGCCTGCGAGAAATAGAAGGAAAGCGGGCTAATGATCCATTCTTCATTGAGAAAATGAATGACACCAAATTGTCATGTCGTGGACGATGCATCTGGGTTCCCGGTCCGGTGATCGTCGGAGCTGGGCCTTCCGGTCTCGCAACCGCGGCTTGCCTGAAACAGAAAGGAGTCCCGACTTTGATTCTAGAAAGATCCGATTGCATAGCTTCTCTGTGGCAGCGCAAGACCTACGATCGTCTTCGTCTTCATTTGCCCAAGCAGTTCTGCGAGCTTCCTTTGATGGGTTTTCCCAGTGATTTCCCGACATATCCGACGAAGCAGCAGTTTATACAGTACTTGGAGAGCTACGCAGAGAGGTTCGACATCAGGCCGAGGTTCAACGAAGCGGTGAGGCAGGCGCAATTCGACGCCACGCTTGGATTTTGGCGAGTGAAAAGCGTGGACCAGGCGGATAAGACGACGGAGTACTTGTGCCGGTGGGTGATCGTCGCGACGGGTGAGAATGCGGAGGCGGTGGTGCCGGAGATAGAAGGAATGGGGGAATTCGGAGGGGATATAAGGCACACGAGCTCGTATAAGAGTGGCGAGGAGTTCAGAGGGAAGAGAGTGTTGGTGGTGGGATGTGGGAATTCCGGCATGGAAGTTTGCTTGGACCTCTGCAACCATAATGCTGCTCCTTCTCTTGCGGTCAGAGATACAGTGCACATATTGCCGCGGAAGATGCTGGGAAAATCGACGTTCGGATGGTCGGTGTGGTTGCTGAAGTGGGTGCCGATGAGGGTGGTGGATGCGTTGCTTCTGATAGTGTCGTGGGTGATGCTCGGCGACACCTCTCGCTTCGGACTGAAGCGCCCCTCCGTGGGTCCCCTTCTGTTAAAAAACCTCTCCGGCAAGACCCCCGTCCTTGACGTCGGCACTCTCTCCAAGATTAAATCCGGCCACATTCAGGTGCGTCCAGGCATTAAGCGGCTAAAACGACATGCCGTTGAATTTGTTGACGGCAAGACTGAGAATTTTGACGCCATTATCCTCGCAACCGGTTACAAAAGCAACGTGCCCTCTTGGCTAAAGGAAGGGGAAATGTTCAGTGAGGAAGATGGATTCCCCAGGAGGCCATTCCCAAATGGTTGGAGGGGTGAGAATGGATTATACGCAGTGGGATTCACGAAACGAGGGTTGCTGGGAGCATCCATGGATGCCAAGAGAATAAGTGAAGATATTGAGAGATTTTGGAAAGTGGAGACAAAGCATTGCAGTACGTTGGGCTCATCATCACCACTTTTGCCACTACCCAATTCATGA 1311 0.5248 MEYCLREIEGKRANDPFFIEKMNDTKLSCRGRCIWVPGPVIVGAGPSGLATAACLKQKGVPTLILERSDCIASLWQRKTYDRLRLHLPKQFCELPLMGFPSDFPTYPTKQQFIQYLESYAERFDIRPRFNEAVRQAQFDATLGFWRVKSVDQADKTTEYLCRWVIVATGENAEAVVPEIEGMGEFGGDIRHTSSYKSGEEFRGKRVLVVGCGNSGMEVCLDLCNHNAAPSLAVRDTVHILPRKMLGKSTFGWSVWLLKWVPMRVVDALLLIVSWVMLGDTSRFGLKRPSVGPLLLKNLSGKTPVLDVGTLSKIKSGHIQVRPGIKRLKRHAVEFVDGKTENFDAIILATGYKSNVPSWLKEGEMFSEEDGFPRRPFPNGWRGENGLYAVGFTKRGLLGASMDAKRISEDIERFWKVETKHCSTLGSSSPLLPLPNS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0550 436 SUPERFAMILY FAD/NAD(P)-binding domain 202 412 IPR036188 -
Lele04g0550 436 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 40 419 - -
Lele04g0550 436 PRINTS Pyridine nucleotide disulphide reductase class-II signature 38 60 - -
Lele04g0550 436 PRINTS Pyridine nucleotide disulphide reductase class-II signature 201 225 - -
Lele04g0550 436 FunFam Flavin-containing monooxygenase 39 419 - -
Lele04g0550 436 PRINTS FAD-dependent pyridine nucleotide reductase signature 161 179 - -
Lele04g0550 436 PRINTS FAD-dependent pyridine nucleotide reductase signature 205 223 - -
Lele04g0550 436 PRINTS FAD-dependent pyridine nucleotide reductase signature 39 58 - -
Lele04g0550 436 SUPERFAMILY FAD/NAD(P)-binding domain 40 238 IPR036188 -
Lele04g0550 436 Pfam Flavin-binding monooxygenase-like 41 356 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lele04g0550 436 Gene3D - 39 419 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0550 Lele-ChrLele04 3334253 3336560 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0550 04 3334253 3336560 Lele25g0504 25 3177991 3181930 CCT
Lele04g0550 04 3334253 3336560 Lele26g0522 26 3301438 3313126 CCT
Lele04g0550 04 3334253 3336560 Lele27g1574 27 21526203 21529695 CCT
Lele04g0550 04 3334253 3336560 Lele28g0515 28 3271550 3275088 CCT
Lele01g0536 01 3207786 3209958 Lele04g0550 04 3334253 3336560 hybridization
Lele02g0531 02 3194282 3201667 Lele04g0550 04 3334253 3336560 hybridization