Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0537 ATGGCAGTGTCTTCCTCGTATCGCCAACCATTATTGATGGACCAGAGTGAAACCAATTCTGATTTAGCACCACGGAAACTTGCTCGGCAATTGAATTTCACGGCCATCGGTGGAGATTCAGTGAACGCAGAGTTGCCGAGGGCACCTGAATCTCAGACACACTTAGAACTACCACCTCAGACGCAGAAACCGTTGCGACAGTCGATTTTGCGGTCAGAATCACTATCGCCGTCTCAAATACAAATTGAACCGAAGTCGCAGTCGCAGGCATACACACCGACACAATCAAAGTTACCTTTAAGGTCGCAGGGGCAGCTGCCATGGTCATCTCCACACACACAACAACAGCGAGCACATCAATCTCAGGTCATGCAGCAATCTCAACCGCGGCCGAAGCTAGTTTCACCTGTTTGTCGAATTCCACACCCTGTGCAGAAAATTTCGATGACGATGTTACAATTACTGAAGCAAGAATCTCCTAGTAAACGACCCTGGCATAATGTGGAATCAAAAGACAGCACTCCAAAGAAACAAAAGCAGTGCAACTGCAAGAATTCTCGATGCCTCAAATTGTACTGTGAGTGTTTTGCAGCTGGGATCCATTGTGATGGCTGCAACTGTTTAAATTGTCATAACAATGTGGATAATGAGGCTGCCAGACAGGAGGCAGTTGGAATAATTTTGGAGCGCAATCCAAATGCTTTCAGACCAAAAATTGCTAGCAGTCCACAAGAATCACGGGGTTCCAAGGAAGAGGCTGAAATTCAAGTATTGGGGAAGCATAATAAAGGATGTCACTGCAAGAAATCAGGCTGCCTTAAGAAGTATTGTGAGTGTTTCCAAGCCAATGTCCTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAAGGAAGTGAAGAAAGAAGTGCTCTTGATCCAATTAACCTCAAACAGGCAGCTAATGCTGCCATCAGTCAAGCAATTGGGGCCTCTGGCTATGGAATTCACATTCCCAAGAGAAGAAAACTTAAGGAAATATTATCTGGCAAAGCTGCCATAGATCAATCTGTTTTGACCGCTCAATTTCAACAGGAAAATGATCCAGTGGTTGTGACACCTGCTCTGTCTGCGTCTGTTGCCCCTGACATTGCCAGTGTAACAATTCCAGGGTCTTCAAGATCAGCATACATGTCCCCATTGGCTGACGCCCTCCAGCCACAGGATGTGAAGTATCTCTGTTCACTTTTTGTTGTTCTATCAGGAGTAGCCGCAAAGACATATGCAGAGTCAATAGGCAGGGTAGACCAGCAAATGGAGATCAAGAAATTTGAAACTTCTGTTGCTTCATCAGCTGAATTACTTCAAGACAATAAAGAAGTCCACAAGCCCATCTTTTATGATCATGGAAAGAAAAATGGAGCAGAGAGAAGTGGAACTAGTGATTCTGGGTCAGATGGATTTGATATACAGAACTACGGGAGGCCATTGTCACCAGGAACGCTAGCATTGATGTGTGATGAACAAGATGACATGTTTCTTTCCAGTAGTTCTGCCAGCGCTGTGTCTTGCAATGATAAAAAAATGATTCATAAGCCATCATATTCTGATGTTTACATGGACATTTATGGAGAGCAGGAACGGCTCGTGCTCACCAGGTTTTGGGACTTTCTCCGTGGACTCATCACTCGTGGAAGCATAAAAGAAGCGATGTTATCCCCATTAGCCAAGAAAGAGGTGGGAAGCAAGCAAGAAGCAGCTGATAATGGCAATAATGGAGCTGAAACTGATTTAATAAGTGAGAAGGGGAAGGAAGCTCACATGCACAGCAATGGCTTTGCAAATTCCCACGTCCCATTAGCCACAGAAGTATATGAGACAAGTAGTGCAACGCCTAATGGACAAGATAATGATGATCTGTCATTGAGGATCGGTCTGCCTACTGGAATTGCTGGGTTGATATAG 1950 0.4456 MAVSSSYRQPLLMDQSETNSDLAPRKLARQLNFTAIGGDSVNAELPRAPESQTHLELPPQTQKPLRQSILRSESLSPSQIQIEPKSQSQAYTPTQSKLPLRSQGQLPWSSPHTQQQRAHQSQVMQQSQPRPKLVSPVCRIPHPVQKISMTMLQLLKQESPSKRPWHNVESKDSTPKKQKQCNCKNSRCLKLYCECFAAGIHCDGCNCLNCHNNVDNEAARQEAVGIILERNPNAFRPKIASSPQESRGSKEEAEIQVLGKHNKGCHCKKSGCLKKYCECFQANVLCSENCKCMDCKNFEGSEERSALDPINLKQAANAAISQAIGASGYGIHIPKRRKLKEILSGKAAIDQSVLTAQFQQENDPVVVTPALSASVAPDIASVTIPGSSRSAYMSPLADALQPQDVKYLCSLFVVLSGVAAKTYAESIGRVDQQMEIKKFETSVASSAELLQDNKEVHKPIFYDHGKKNGAERSGTSDSGSDGFDIQNYGRPLSPGTLALMCDEQDDMFLSSSSASAVSCNDKKMIHKPSYSDVYMDIYGEQERLVLTRFWDFLRGLITRGSIKEAMLSPLAKKEVGSKQEAADNGNNGAETDLISEKGKEAHMHSNGFANSHVPLATEVYETSSATPNGQDNDDLSLRIGLPTGIAGLI 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0537 649 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 263 297 IPR005172 -
Lele04g0537 649 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 178 213 IPR005172 -
Lele04g0537 649 PANTHER TESMIN/TSO1-RELATED 49 563 IPR028307 -
Lele04g0537 649 MobiDBLite consensus disorder prediction 54 132 - -
Lele04g0537 649 SMART CXC_2 260 301 IPR033467 -
Lele04g0537 649 SMART CXC_2 176 216 IPR033467 -
Lele04g0537 649 ProSiteProfiles CRC domain profile. 177 300 IPR005172 -
Lele04g0537 649 MobiDBLite consensus disorder prediction 158 177 - -
Lele04g0537 649 MobiDBLite consensus disorder prediction 463 485 - -
Lele04g0537 649 MobiDBLite consensus disorder prediction 1 22 - -
Lele04g0537 649 MobiDBLite consensus disorder prediction 50 136 - -
Lele04g0537 649 MobiDBLite consensus disorder prediction 162 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0537 Lele-ChrLele04 3245059 3250372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0537 158 575 CPP Transcription Factor Family AT4G29000 51.034 7.16e-127 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lele04g0537 TCR 2.6e-12 No_clan