Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0494 ATGGATCGTAAAACCATTTTCTTTCTTGTTCTTGTTTCCATGTCTTTTATTCCACTGGTCGTCTGTATTAATACCAATCATGATCAGTCTCAGTTTTTTGTTCTCATGAAGGAGTCTTTCTCCGGTAAGTACCCGTCCAGTTGGGATGTCACCGGAGGAAAATCTGTGTGCAGCTTCACCGGGGTAGCCTGCAACGACCGAGGAGATGTCTTCAGTCTTGACGTCTCCGGTTGGTCACTTTCTGGGGACTTGCCTGAAAATATATGCTCTTACTTGCCGGAGTTACGTGTTCTTCGTCTCAGCAATAACCACCTCAAGGGAAACTTTCCCGAAACCATAGTCAACTGTTCCCACTTGGAAGAGCTCAACATGAGTTCCATGTCTCATGCTGGAAAGCTTCCTGATTTCTCACCTCTGACATCTCTCAAGATTCTTGATTTGTCATACAACCTTTTCATCGGTCGGTTTCCCATGTCCGTGTTCAACCTCTCCAGTCTCGAGGTCCTTAACTTGAACGAAAATGAAGGCTTCGACTTATGGACGCTTCCGAAGGATGTTTACAAACTCAAAAATTTCAACTCCATGGTGCTCACAACATGCATGATGCATGGCCAGATTCCGGCGTCTTTAGGGAACCTTACGTCTCTTGTTGATCTTGAGTTGAGTGGAAACTTCCTCACTGGTCAAATTCCTCGGGAGCTTGGAATGCTGAAAAATCTGCAATATCTTGAGCTTTACTATAACAGTCTTGTGGGTGATATACCTGAGGAACTAGGAAATCTCAAGGAGCTCAAAGACATGGATTTGTCAGTCAATAAGTTGACCGGGAAAATCCCAGAATCTATATGTCGCCTTCCCAAGCTTGAAGTCATACAGCTTTACAACAATAGCCTCACAGGAGAAATCCCAGCCGTGATAGCAAACTCAACATCCTTGAAAATATTGTCTATTTATGACAATTTCCTGAGTGGCCACGTCCCAAGAAATCTTGGTCAGCTCTCAGAATTGGTAGTTTTAGACATATCCGAAAATCAACTGTCTGGTCCATTGCCAACAGGGGTTTGCAAGGGGGGTAAACTTCTCTATTTTCTTGTTCTGGATAATCAGTTTTCTGGAGAGCTACCAGACGTTTATGCAAAATGCTTGACTCTTTTGAGGTTCAGAGTGAGTAACAACCACTTGCAGGGCTCAGTTCCTAAGGATCTCTTTGGCTTGCCACATGTTTCAATAATTGACTTGGCACACAATAATTTTTCTGGTTCCATTTCTGAGTCCATTGGGAATTCTAGAAACTTGTCAGAGCTTTTCATACAGAGGAACCGAATTTCTGGATTCATACCTCCTTCCATCTCTCGTGCCACCAATCTTGTCAAGATTGATCTCAGTTATAACCTTCTCTCTGGTCCAATACCTTCAGAAATCGGGAACCTGAAGAAGCTTAATTCACTGATTCTGCAAGCAAACAAGCTAGATTCTTCCATCCCCAGCTCACTTTCCTTATTGCAATCCCTCAACGTTCTTGATCTCTCCAATAACCTTTTGAATGGGAGCATCTCTGATAGTCTATCTGCACTCTTACCCAACTACATCAATTTCTCAAACAATTTGCTTTCTGGTCCAATTCCTTCCTCATTGATGAAAGGAGGGTTATTAGAAAGCTTTTCAGGGAATCCAGGTCTCTGTGTGTTGCCGGTTTATGCTAACTCATCAGACCAGAATTTCCCTGTGTGTCCACAAAGTAGCAGCAAAAAAAGGCTAAGGGTCACATGGGTAGTTCCAATTGCAGTAGCTTTGATCATCATTGGATTTGGAGCTCTATTGGTTTCAAGACGCAGGCCTGCCAAAGATAAGGCAACCATGGAACAAGATGATGAGTCTATATCTTCTTCATTCTTCTCCTACGACTTGAAGAGCTTCCACAAATTAAACTATGATCGGCAGGAGATCATTGAGGCCATGGTGGATAAGAACATAGTAGGATACGGTGGATCTGGGACAGTGTACAAGATTGAGTTGAAAAGCGGTGAACTTGTTGCAGTCAAGAAGCTGTGGAGTCGAACATCAAAGGATTCAGCTCAAGAGGGTCGCATGGTTTTAGACAAGGAGTTGAAAAACGAGGTTTTACAAGCAAGAGGAGGCAAAGATTCCACCACAACCGTAATTGCAGGAACCTATGGTTACTTAGCCCCAGAATATGCATATTCGTCAAGAGCAACAACCAAGGGTGATGTCTACAGTTTCGGGGTGATTCTAATGGAACTGATAACTGGGAAGAAGCCTGTGGAGGCTGAGTTTGGAGAGAACAGGAATATAGTATACTGGGTTTCAAACAAGGTAGACAGCAAGGAAGGAATTAATGAAATAATAGACAAGAGATTATCATCAGGGTTATTCAGAGATGAAATTATACAAGTTATCAAAATTGCCATTAAGTGCACCTACAAATCTCCCGCTAATCGACCAACCATGAAGGAGGTGGTTCAGCGACTCATTGAAGCAGACCCATGCAGATTCGATTCTGGCAAGTTGTCAGCAGACAAGACCAATACCAAATAA 2556 0.4296 MDRKTIFFLVLVSMSFIPLVVCINTNHDQSQFFVLMKESFSGKYPSSWDVTGGKSVCSFTGVACNDRGDVFSLDVSGWSLSGDLPENICSYLPELRVLRLSNNHLKGNFPETIVNCSHLEELNMSSMSHAGKLPDFSPLTSLKILDLSYNLFIGRFPMSVFNLSSLEVLNLNENEGFDLWTLPKDVYKLKNFNSMVLTTCMMHGQIPASLGNLTSLVDLELSGNFLTGQIPRELGMLKNLQYLELYYNSLVGDIPEELGNLKELKDMDLSVNKLTGKIPESICRLPKLEVIQLYNNSLTGEIPAVIANSTSLKILSIYDNFLSGHVPRNLGQLSELVVLDISENQLSGPLPTGVCKGGKLLYFLVLDNQFSGELPDVYAKCLTLLRFRVSNNHLQGSVPKDLFGLPHVSIIDLAHNNFSGSISESIGNSRNLSELFIQRNRISGFIPPSISRATNLVKIDLSYNLLSGPIPSEIGNLKKLNSLILQANKLDSSIPSSLSLLQSLNVLDLSNNLLNGSISDSLSALLPNYINFSNNLLSGPIPSSLMKGGLLESFSGNPGLCVLPVYANSSDQNFPVCPQSSSKKRLRVTWVVPIAVALIIIGFGALLVSRRRPAKDKATMEQDDESISSSFFSYDLKSFHKLNYDRQEIIEAMVDKNIVGYGGSGTVYKIELKSGELVAVKKLWSRTSKDSAQEGRMVLDKELKNEVLQARGGKDSTTTVIAGTYGYLAPEYAYSSRATTKGDVYSFGVILMELITGKKPVEAEFGENRNIVYWVSNKVDSKEGINEIIDKRLSSGLFRDEIIQVIKIAIKCTYKSPANRPTMKEVVQRLIEADPCRFDSGKLSADKTNTK 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0494 851 FunFam Receptor protein-tyrosine kinase CEPR1 285 571 - -
Lele04g0494 851 Gene3D Ribonuclease Inhibitor 27 307 IPR032675 -
Lele04g0494 851 SUPERFAMILY L domain-like 254 564 - -
Lele04g0494 851 SMART LRR_typ_2 477 500 IPR003591 -
Lele04g0494 851 SMART LRR_typ_2 92 116 IPR003591 -
Lele04g0494 851 SMART LRR_typ_2 333 357 IPR003591 -
Lele04g0494 851 SMART LRR_typ_2 501 525 IPR003591 -
Lele04g0494 851 SMART LRR_typ_2 285 309 IPR003591 -
Lele04g0494 851 SMART LRR_typ_2 163 189 IPR003591 -
Lele04g0494 851 SMART LRR_typ_2 237 261 IPR003591 -
Lele04g0494 851 SMART LRR_typ_2 213 236 IPR003591 -
Lele04g0494 851 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Lele04g0494 851 Pfam Leucine rich repeat 430 490 IPR001611 GO:0005515
Lele04g0494 851 PANTHER LEUCINE RICH REPEAT KINASE 2 210 707 - -
Lele04g0494 851 SMART serkin_6 653 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0494 851 ProSitePatterns Protein kinases ATP-binding region signature. 659 682 IPR017441 GO:0005524
Lele04g0494 851 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 27 179 - -
Lele04g0494 851 PRINTS Leucine-rich repeat signature 336 349 - -
Lele04g0494 851 PRINTS Leucine-rich repeat signature 501 514 - -
Lele04g0494 851 ProSiteProfiles Protein kinase domain profile. 408 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0494 851 Gene3D Transferase(Phosphotransferase) domain 1 706 836 - -
Lele04g0494 851 SUPERFAMILY Protein kinase-like (PK-like) 656 830 IPR011009 -
Lele04g0494 851 Pfam Protein kinase domain 715 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0494 851 Gene3D Ribonuclease Inhibitor 308 572 IPR032675 -
Lele04g0494 851 SUPERFAMILY L domain-like 71 351 - -
Lele04g0494 851 FunFam Leucine-rich repeat receptor-like protein kinase 180 281 - -
Lele04g0494 851 Gene3D Phosphorylase Kinase; domain 1 616 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0494 Lele-ChrLele04 2969036 2972074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0494 706 835 Receptor kinase-like Gene Family AT5G49660 67.692 4.84e-48 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele04g0494 Pkinase 5.9e-11 CL0016