Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0493 ATGGCGGAAAGGGCACATCAGCGGAATTTGCAGAGCTCATTTCAGAGCTTCTTCGAGGGATGGCTTTCCCGCCAACAGAGCTTCCTCGACCAGCTTCTCACTCTCTCCCTCGCTCCAGACTCTCCCCTCAAAATGGAGCAACAGAATGCTCTTATCGACCAAGTCCTCTCTCACTACCAGCAATACTTCCAGGAGAGATCCAGACTCGCCGATCCCGATGTCTTCCTCCTCTTTTCTCCGACTTGGTTAACTTCTTACGAGCGAGCTCTCCTCTGGATTGCGGACTTCAAGCCTTCCCTGGTGCTTCGTCTGGTGGATGGCGCCGTCGGCGATTTAGCGCCGGAGCAGAAGGAGACGCTGGAGCGAGTCAAGGCCGATACCAGGAGGCAGGAGAGGGTCGTGACGGGGGTAATGGCGAGCGTTCAGGAGATCCTCGGAGGACCCTCGATGCTGCAATTGGCGAGGCGAGTTGGGAGGCTGGCCGATGGGGAAATTGATGAGCTGGACGGTGCCTGGGAAGTGCTGAAGAATGCGATGACGGGGTTAATAGAGAAAGCCGACGAGCTGCGAGTGTCGACTGCGAGGAAGGTTGTAGAGATTTTGAATCCGTTGCAGACGGTGCAGTTTTTGGCGGCGGCGGCTCAGTTTCAGCTTCGCGTGAGGAGTTTGGGAACGCGGTTGGAGGCGCGGTTCAGAGAGGGTCAAGCTCCTTCTCTGTCCTAA 723 0.5671 MAERAHQRNLQSSFQSFFEGWLSRQQSFLDQLLTLSLAPDSPLKMEQQNALIDQVLSHYQQYFQERSRLADPDVFLLFSPTWLTSYERALLWIADFKPSLVLRLVDGAVGDLAPEQKETLERVKADTRRQERVVTGVMASVQEILGGPSMLQLARRVGRLADGEIDELDGAWEVLKNAMTGLIEKADELRVSTARKVVEILNPLQTVQFLAAAAQFQLRVRSLGTRLEARFREGQAPSLS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0493 240 ProSiteProfiles DOG1 domain profile. 11 230 IPR025422 GO:0006351|GO:0043565
Lele04g0493 240 Pfam Seed dormancy control 44 105 IPR025422 GO:0006351|GO:0043565
Lele04g0493 240 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 13 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0493 Lele-ChrLele04 2963314 2964036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0493 31 233 bZIP Transcription Factor Family AT5G06960 26.027 9.45e-18 79.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0486 01 2880365 2881322 Lele04g0493 04 2963314 2964036 hybridization