Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0478 ATGGTGGTGAGGAAGGTGGGGAAGTACGAAATCGGGAGGACAATTGGGGAGGGAACCTTCGCCAAGGTAAAGTTTGCTCAGAACACGGAGACTGGCGAGAGTGTCGCTATGAAAGTGCTCGACCGTAGCACCATCATCAAGCACAAGACGGTCGATCAGGCAAGTATCAAGAAGGAGATTTCTATTATGAAGATAGTTCGACATCCATATGTTGTTCGTCTGCATGAGGTTCTAGCAAGTCGTACTAAGATTTACATCATATTGGAGTTCATTACAGGTGGTGAATTGTTTGACAAAATTGTACACCATGGCCGGCTTAGTGAAGCTGAAGCTAGAAGATACTTCCAACAGCTTATTGATGGTGTGGATTATTGCCACAGTAAGGGAGTCTATCACAGAGATTTAAAGGGGGTTAATGTCCTTCGGACAACCTGTGGGACTCCAAACTATGTAGCCCCTGAGGTACTTAGTCACAAGGGTTACAATGGAGCAGCGGCAGATGTTTGTATTCATGATCTCTATATAAGGCATCTTGAGAACCTGAGAATCATCAAAAGGCATCTAAGAAAACGCATTACCATTGAACAGCTAAGAAGTGATGAGTGGTTTCATAAGAACTATGTTCCTGCCAGTCTTCTTGAGTATGAAGACGTGAATCTGGACGATGTAAATGCAGCTTTTGATGATTCTGAGGATCAGACAGTCAATCAACAATGTGAGAATAAAGACGGGGGTCCATTAATGCTTAATGCATTTGACTTGATAATTCTATCTCAAGGCTTAAATCTTGCAACAATCTTTGATCGTGGACGGGATTCCATGAAGTACCAAACACGCTTTATCTCTCAAAAGCCAGCAAAGGTGGTTTTATCAAGCATGGAAGTTGTGGCTCAATCAATGGGATTTAAGACACATATTCGCAACTATAAGATTTTTGAAGTTGCTCCATCATTCTTCATGGTAGACATTCAAAAAGCAGCTGGAGACGTAGGTGAATACCTCAAGTTTTACAAGAACTTCTGTAGCAATCTTGATGATATCATCTGGAAACCGCCTTATGAAGAAAGTCAATCAAGGAGCTCCACCAATAAAAGTAGAAGGCGATCCTCTCACTTCATAAATGAAAGCAAAGGATCACGATTAGTGCCTAAATTTAGCTGCTACTTTTTACATGATATATTAGACAAATCCTCCGAAATCCCCACAAGAGCATTTACCATCGACAAACTTGTGAAGCCGCTTGCTATCTCGAATGACAATTTCTCTACCACTCAGTTTTGA 1281 0.4145 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKTVDQASIKKEISIMKIVRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIVHHGRLSEAEARRYFQQLIDGVDYCHSKGVYHRDLKGVNVLRTTCGTPNYVAPEVLSHKGYNGAAADVCIHDLYIRHLENLRIIKRHLRKRITIEQLRSDEWFHKNYVPASLLEYEDVNLDDVNAAFDDSEDQTVNQQCENKDGGPLMLNAFDLIILSQGLNLATIFDRGRDSMKYQTRFISQKPAKVVLSSMEVVAQSMGFKTHIRNYKIFEVAPSFFMVDIQKAAGDVGEYLKFYKNFCSNLDDIIWKPPYEESQSRSSTNKSRRRSSHFINESKGSRLVPKFSCYFLHDILDKSSEIPTRAFTIDKLVKPLAISNDNFSTTQF 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0478 426 FunFam Non-specific serine/threonine protein kinase 1 90 - -
Lele04g0478 426 Pfam Protein kinase domain 9 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0478 426 SUPERFAMILY Protein kinase-like (PK-like) 6 220 IPR011009 -
Lele04g0478 426 SMART serkin_6 9 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0478 426 Gene3D Kinase associated domain 1, KA1 248 350 - -
Lele04g0478 426 ProSiteProfiles NAF domain profile. 244 268 IPR018451 GO:0007165
Lele04g0478 426 Pfam NAF domain 246 304 IPR004041 GO:0007165
Lele04g0478 426 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Lele04g0478 426 FunFam Maternal embryonic leucine zipper kinase 4 143 - -
Lele04g0478 426 CDD CIPK_C 250 346 - -
Lele04g0478 426 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 183 335 - -
Lele04g0478 426 Gene3D Transferase(Phosphotransferase) domain 1 143 247 - -
Lele04g0478 426 Gene3D Transferase(Phosphotransferase) domain 1 3 142 - -
Lele04g0478 426 ProSiteProfiles Protein kinase domain profile. 9 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0478 Lele-ChrLele04 2866260 2872301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0478 1 311 CBL-interacting serine-threonine protein kinases AT4G24400 65.054 2.39e-161 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele04g0478 Pkinase 7.2e-35 CL0016