Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0457 ATGCCTCACAGAGCGACTTACATTTTCCCGAGGCAATTCCCGGACCGTAGGTCGGATGAATCTTCCCAACAGCTCTTAGATCACGAGAAGAAGAAGATCTTCGACTCCATCAAATCGGGAAACTTTGGCGCTGAATGTGACGATAAAAAAAAGCCGTCACTATCAACTACTCCCATAAAAAACGATGTCATTTATGCGCCAAGTAAACACTCAGCTGTATCCGATCTTTTCACGGGAGGAGGCAAGCTTCGGACTAAACACAAGCAAGTTGCTGATATCTGCAATTGGTCGATAGAGAAAAAGGGGGGAAGATCGGGTCACGTGAAAGCGTACTCTCACAGGTTATCCAGCGAGGAAGAACGCGAGCTTCTGCTTCCACCGGAGTCGGAGCCGCCTCCTCCCCCACCGGAGACAGTGAAGAATTCTGCCATTGACCAGAGCTTTGATCGGCAGGTGTCGTTACCAAGGTTGTCCAGTAATGGGAGTAGCTATGCTGCGAGCTTGTTCTCGGGGACAACGTCGGAGGAGACGACGTCGTCGATTTTCACCTCGTCGAGGAAGCAAGAGGAAGATGAAAAAGAGAGTAAAGATAAGATGGCGCAGAAGTCCCAAGAGAGCTACCGCCTGCAAGTTACGTTGGCCAAGAGGCTCACTGGTCTAGCAAGTATTGCTAATGAGCCTTCGCTTACTCTGGGCACTGAAAACGAAACTTGGGATGCCGAATCCGTTTCTTATCGTTTATGGGTAAGCGGCTGTTTATCATACTCTGACAAGATAACGGATGGTTTCTATAACATTCTGGGGATAAATCCATATTTGTGGGTAATGTGCAATAATGAGGAGGAGGGAAGGCGGCTCCCATCTCTCTTAGCGCTTAGAGCAGTTGAACCTAGTGATACATCTATGGAGGTGGTTCTTGTCGATATCCATGAGGATTCCAGACTAAAGCAACTTCAGGATAAAGCACAAGAATTGTATTGTGCGTCAGAGAACACCTTGGTGTTGGTGGAAAAGCTAGGAAAGCTTGTTGCCATATATATGGGGGGTACTTTTCCGGCAGAACAAGGTGATCTCCACGGGCACTGGAAGTTGGTTAGTAAGAGATTGAGGAAATTTCACAAGTGTGTTGTGCTTCCTATCGGCAGCGTATCTTCTGGACTTTGTAGGCATCGAGCAATTCTTTTCAAGAGGTTGGCAGATTACATAGGCTGGGGACAGAACGATCAGCAAGTTAGTGAAGCTGATTTACTAATAAACCCTACGGGCTCCATTTACACGTCAGTTTATCAAACTTCAAAAGGAACAGAACCTCCTCCTTTGGTTCCTTTTGGCTTAAAAAGGAATACTGAGGAAGGTGCAGTTCTAGGTTCAATTTTGCCTTCCATCTGGGAAGGTGTTTCTGAAGCCCTTCATCCGCCGGTTGAGGCATCATTACATGAATATCCCAGGCTTGGTGAAGATCCAGTTGTAGTACAAGAAACTTCCAACAACGAGAAAAGTTCTTTGGAAAAATCTATATTGAGCTCTTCAAACCAGTCAGAACCGGAGAAGGTAGACAGTGGACTTGAAAACCAGGGCTTCTTTCCTTCTAATAAGGATATTCCAAGATACTTGAATCTTGAACCATCACTTGCAATGGACTGGCTTGAGATATCATGGGATGATTTACGGATCAAAGAGCGTGTTGGTGCCGGTAACTTTTTTGCTTACTTTTTTTTACTGGATCCACCAAACAAACATATTTCGACATATTTCCCTTGTAGCTGGCTCTGTGATGCCACTATTCTTTCCTCTGCAGGTTCATTTGGGACAGTGTACCGCAGTGAATGGCATGGATCAGTTGCAATAATGAAGCGCGTACGCCATCCAAATGTGGTGCTCTTCATGGGTGCAGTTACAAAACGCCCTCATCTTTCCATAGTGACAGAATATTTGCCTAGGGGTAGTTTATACCGCCTGATTCATAGACCCACTACTGGCGAAAATCTGGATCAAAGGAGAAAACTGCGGATGGCTTTAGATGTGGCTAAAGGGATCAATTATCTCCACTGCCTTAACCCTCCAGTTTTGCACTGGGATCTCAAATCCCCAAACTTGTTAGTGGACAGAAATTGGACCGTAAAGCCCGAGTGGATGGCTCCTGAATTCCTTCGTGGAGAACCTTCAAATGAGAAGTCTGATGTTTATAGTTTTGGAGTCGTCTTGTGGGAACTTGTGACCATGCAACAACCGTGGAGTGGTCTTAGCCCTGCCCAGGTGGTTGGAGCTGTTGCTTTCCAAAATAGGAGGCTTGTTATCCCTCCAAACATCTCCCCAGCTCTTAGCTCTCTCATGGAATCTTGTTGGGCTGATGACCCTAATGAACGACCATCTTTCACTAACATAGTGGACTCGCTGAAGAAGCTGCTGAAGTCTCCAGCTGAGATTTCGGACGAGCCCCTTCAGGAGGAAAATTCGATGGACAAGAATGAAAAGGAATATATGTGGCACGATCTCGGGCTGCAAATTGTTCTGATCCTGGTCATGGTGTTCATGTTCTTGCATATGCACGACATTCCCAGGAAGCTCTTCACCAAGTTCCGTCTCCGAAGCCGATCCGATATTCAAGCCAAGCGCCACTTTGTTCTAGGCGCTCAGCTCCTTGCGCGAGCTAGATCCTCCAAGACTAGATCCGCTTCGAATTCATTGGCCAACGAGGCCCTAGCCGAATCCGAGAAAGCCATCGCGCTTGACCCCAAGGATGCAGCCGCTTACGTTCTCAAAGCCTTGGCTCTTGATCTCCAAGGCTTTAGGACTTCGGCTCTTGACTCGCTCGACATGGCTTTGTCTCCGCTTGCCGTGAAGTCCCTCGCCGATGAAGAGAAAGGGGACGCGCTTCTCAAGAGGGCTGAGTTGAAAATGGCGATGAGTGAACGCGGCCGGGTTGATTCGGCTCTGACGGATTTGGTTGAGTCGGTAAAGCTGAATTCGAAAAACGTCAAAGCTTTTTGTTTGTTAGGGAAATGCTACGTGGCAAAGAAGCTGAAAGAGGAAGCCAGGACGGCTTATGAGGAGGCTCTCAAGGTGGAACCCCATTCAACTGTGGCTCAAGAGGCCTTAAGCAGATTGGGTTCATAG 3117 0.4732 MPHRATYIFPRQFPDRRSDESSQQLLDHEKKKIFDSIKSGNFGAECDDKKKPSLSTTPIKNDVIYAPSKHSAVSDLFTGGGKLRTKHKQVADICNWSIEKKGGRSGHVKAYSHRLSSEEERELLLPPESEPPPPPPETVKNSAIDQSFDRQVSLPRLSSNGSSYAASLFSGTTSEETTSSIFTSSRKQEEDEKESKDKMAQKSQESYRLQVTLAKRLTGLASIANEPSLTLGTENETWDAESVSYRLWVSGCLSYSDKITDGFYNILGINPYLWVMCNNEEEGRRLPSLLALRAVEPSDTSMEVVLVDIHEDSRLKQLQDKAQELYCASENTLVLVEKLGKLVAIYMGGTFPAEQGDLHGHWKLVSKRLRKFHKCVVLPIGSVSSGLCRHRAILFKRLADYIGWGQNDQQVSEADLLINPTGSIYTSVYQTSKGTEPPPLVPFGLKRNTEEGAVLGSILPSIWEGVSEALHPPVEASLHEYPRLGEDPVVVQETSNNEKSSLEKSILSSSNQSEPEKVDSGLENQGFFPSNKDIPRYLNLEPSLAMDWLEISWDDLRIKERVGAGNFFAYFFLLDPPNKHISTYFPCSWLCDATILSSAGSFGTVYRSEWHGSVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPTTGENLDQRRKLRMALDVAKGINYLHCLNPPVLHWDLKSPNLLVDRNWTVKPEWMAPEFLRGEPSNEKSDVYSFGVVLWELVTMQQPWSGLSPAQVVGAVAFQNRRLVIPPNISPALSSLMESCWADDPNERPSFTNIVDSLKKLLKSPAEISDEPLQEENSMDKNEKEYMWHDLGLQIVLILVMVFMFLHMHDIPRKLFTKFRLRSRSDIQAKRHFVLGAQLLARARSSKTRSASNSLANEALAESEKAIALDPKDAAAYVLKALALDLQGFRTSALDSLDMALSPLAVKSLADEEKGDALLKRAELKMAMSERGRVDSALTDLVESVKLNSKNVKAFCLLGKCYVAKKLKEEARTAYEEALKVEPHSTVAQEALSRLGS 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0457 1038 SUPERFAMILY TPR-like 905 1035 IPR011990 GO:0005515
Lele04g0457 1038 Gene3D Transferase(Phosphotransferase) domain 1 594 708 - -
Lele04g0457 1038 SMART tpr_5 993 1026 IPR019734 GO:0005515
Lele04g0457 1038 SMART tpr_5 956 992 IPR019734 GO:0005515
Lele04g0457 1038 MobiDBLite consensus disorder prediction 493 525 - -
Lele04g0457 1038 MobiDBLite consensus disorder prediction 185 203 - -
Lele04g0457 1038 SUPERFAMILY Protein kinase-like (PK-like) 599 807 IPR011009 -
Lele04g0457 1038 MobiDBLite consensus disorder prediction 1 23 - -
Lele04g0457 1038 MobiDBLite consensus disorder prediction 177 204 - -
Lele04g0457 1038 SMART serkin_6 589 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0457 1038 ProSiteProfiles Protein kinase domain profile. 556 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0457 1038 ProSiteProfiles TPR repeat profile. 993 1026 IPR019734 GO:0005515
Lele04g0457 1038 ProSitePatterns Serine/Threonine protein kinases active-site signature. 689 701 IPR008271 GO:0004672|GO:0006468
Lele04g0457 1038 MobiDBLite consensus disorder prediction 103 141 - -
Lele04g0457 1038 MobiDBLite consensus disorder prediction 103 126 - -
Lele04g0457 1038 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 246 808 - -
Lele04g0457 1038 Gene3D Tetratricopeptide repeat domain 970 1038 IPR011990 GO:0005515
Lele04g0457 1038 Pfam Ethylene-responsive protein kinase Le-CTR1 240 403 - -
Lele04g0457 1038 Pfam Protein tyrosine and serine/threonine kinase 708 799 IPR001245 GO:0004672|GO:0006468
Lele04g0457 1038 CDD STKc_MAP3K-like 600 799 - -
Lele04g0457 1038 Gene3D Transferase(Phosphotransferase) domain 1 709 811 - -
Lele04g0457 1038 Gene3D Tetratricopeptide repeat domain 892 969 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0457 Lele-ChrLele04 2692326 2700329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0457 480 809 MAP Kinase Kinase Kinase AT4G24480 57.368 2.60e-130 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele04g0457 EDR1 7.8e-56 CL0125