Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0448 ATGAGTTCAGACTTCAGGGTCATGTTCGCCCTTGGTGGCTACTGTGTCAAAGAGTTTGCTTCGTTAAATCTGAAAGCATGCGTTAAAGAGTTTACTTCAAGTTGGTGCCGTCTGGCCAACTGTCGATCTCAGCAACGAGTTTACAAATCTTTGGTACGGAAGCAAATTTCAAGGAGTCCTTTCAGAAAAAGAAAAAGTACAGAGATTAAGTTACAATTTATGCGAAGTAAAGAAATGGACGCTAGCAGAATGGAAGCCGAGCGGCTGCTTGGGGTCGCCGAAAAGCTGTTACAGAACCGGGATCTGAGCGGCTCAAGGGACTTTGCTATTTTAGCTCAGGAAGCCGAGCCGCTTCTGGAAGGTTCCGATCAGATCTTAGCCGTCATCGACGTGCTTCTTGCGGCGGATAAACGCATTAACAATCACCACGACTGGTACGCCATTCTTCAGGTGGATCGTCGATCCAACGATTTCGATCTCATCAAGAAACAGTATCGTCGGCTCGCGCTTCTCCTTCACCCGGACAAGAACAGGTTCTCTCTAGCCGATCATGCTTTCAGGCTCGTTGCCGAGGCATGGGCCGTGCTATCGGACCAGGCTAAGAAGGCAAACTTCGATAAGGAGCTCAGCTTCTTTACCAGGGTAGACTTGAGTATGCCTAGCTGGGTTCAACAAGACAAATTGCCGGTTCGCAGGGGTGGGCCTGGGCTCAGTGGGCGGAATCAAGTTGATGGTGGCAGTGACGCGAGGGAGGAAGAAGCGGATGAGAACCCACGGCGGAGGCCGACCTTCTGGACGACATGCCCATATTGTTACTACATATACGAGTACCCTAAGATTTACGAGAATTGTTGTTTGAGGTGCCAGAATTGCGAGAAGTCTTTCCATGGCGTCTCGATTCCATCTTTGCCGCCTCTTGTGCCGGGACAAGAAGCTTATCATTGTTGTTGGGGTTTCTTTCCGATGGGATTCTTTGTCGGAAATACCGGCGGTAAGTCGGGTGTGCCATCCACTCTCAATTCGCCGCCACCTGTCTCAACTGCGCCGGCAGAGAACGGAATGCATAACGGGCTACCGCCGCCGGCCCCAAGCTCTGCGGCTTCCAGGGGGGCAACGCCGGTCGTGTCGAATGGGACTGCTTCAAGGTTGGGTATGGTTAAGCGGAAGCGAGGAAGGCCTCGGAAAAATCCTTTTTCGGCATGA 1203 0.5162 MSSDFRVMFALGGYCVKEFASLNLKACVKEFTSSWCRLANCRSQQRVYKSLVRKQISRSPFRKRKSTEIKLQFMRSKEMDASRMEAERLLGVAEKLLQNRDLSGSRDFAILAQEAEPLLEGSDQILAVIDVLLAADKRINNHHDWYAILQVDRRSNDFDLIKKQYRRLALLLHPDKNRFSLADHAFRLVAEAWAVLSDQAKKANFDKELSFFTRVDLSMPSWVQQDKLPVRRGGPGLSGRNQVDGGSDAREEEADENPRRRPTFWTTCPYCYYIYEYPKIYENCCLRCQNCEKSFHGVSIPSLPPLVPGQEAYHCCWGFFPMGFFVGNTGGKSGVPSTLNSPPPVSTAPAENGMHNGLPPPAPSSAASRGATPVVSNGTASRLGMVKRKRGRPRKNPFSA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0448 400 CDD DnaJ 144 198 IPR001623 -
Lele04g0448 400 ProSiteProfiles dnaJ domain profile. 144 209 IPR001623 -
Lele04g0448 400 ProSitePatterns Nt-dnaJ domain signature. 186 205 IPR018253 -
Lele04g0448 400 PRINTS DnaJ domain signature 165 180 IPR001623 -
Lele04g0448 400 PRINTS DnaJ domain signature 181 201 IPR001623 -
Lele04g0448 400 PRINTS DnaJ domain signature 146 164 IPR001623 -
Lele04g0448 400 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 79 363 - -
Lele04g0448 400 SMART dnaj_3 143 201 IPR001623 -
Lele04g0448 400 MobiDBLite consensus disorder prediction 227 258 - -
Lele04g0448 400 Pfam DnaJ domain 144 206 IPR001623 -
Lele04g0448 400 Gene3D DnaJ domain 133 216 IPR036869 -
Lele04g0448 400 MobiDBLite consensus disorder prediction 385 400 - -
Lele04g0448 400 MobiDBLite consensus disorder prediction 334 400 - -
Lele04g0448 400 SUPERFAMILY Chaperone J-domain 137 210 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0448 Lele-ChrLele04 2632421 2633818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0448 43 397 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 45.358 9.43e-98 294