Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0435 ATGACGTGGGATGAATGGGACAACAATATCCCAGAAGGTGACCAACCTGACCAAGATCCCTATCTCAACTTCGATTTCTTCTCTGCTTTGTCCAAGCCCAAGGATTATTATAAGATTCTGGAAGTAGATTATGATGCTACAGACGACGATATTCGTTCCAATTACATTCGTCTAGCTCTGAAATGGCATCCGGACAAGCAGAAAGGCCAAGATGCCGCAACCTCACGATTCCAAGACATAAACGAGGCTTATCAGGTCTTGTGCGATCCTGCCAAAAGGAGAGAGTATGACGAAAATGGGATGCTTTATGTCTATGATTGCAATCTCATGGATTATCTTAATCGTTACAAGAGCCTTATATTGACGTGCAATGGCCTTGGGATGAAGCAATTCATATGGAATGAAGGAGACATGCTTATGATGTACTAG 429 0.4266 MTWDEWDNNIPEGDQPDQDPYLNFDFFSALSKPKDYYKILEVDYDATDDDIRSNYIRLALKWHPDKQKGQDAATSRFQDINEAYQVLCDPAKRREYDENGMLYVYDCNLMDYLNRYKSLILTCNGLGMKQFIWNEGDMLMMY 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0435 142 Pfam DnaJ domain 35 97 IPR001623 -
Lele04g0435 142 Gene3D DnaJ domain 27 111 IPR036869 -
Lele04g0435 142 SUPERFAMILY Chaperone J-domain 31 125 IPR036869 -
Lele04g0435 142 FunFam Chaperone protein DNAj, putative 27 114 - -
Lele04g0435 142 ProSiteProfiles dnaJ domain profile. 35 100 IPR001623 -
Lele04g0435 142 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 133 - -
Lele04g0435 142 ProSitePatterns Nt-dnaJ domain signature. 77 96 IPR018253 -
Lele04g0435 142 SMART dnaj_3 34 92 IPR001623 -
Lele04g0435 142 PRINTS DnaJ domain signature 92 111 IPR001623 -
Lele04g0435 142 PRINTS DnaJ domain signature 72 92 IPR001623 -
Lele04g0435 142 PRINTS DnaJ domain signature 37 55 IPR001623 -
Lele04g0435 142 PRINTS DnaJ domain signature 55 70 IPR001623 -
Lele04g0435 142 CDD DnaJ 35 89 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0435 Lele-ChrLele04 2568815 2571247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0435 28 97 C2H2 Transcription Factor Family AT1G74250 40.000 3.25e-11 58.2