Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0427 ATGGCTGCCAATTCGCATGGAGGTGGTTCTTCTTTTGGCCATGCTGCCCCTTATCGTTCAAGAGAGGGCCTCACCACGAGATCAGTTGCTGGTTCGAATGAAATCCAATTGCATATTGATCCGATGGACTTGGACGACGAGATCAGCGGTCTTCGTGGCCAAGTTAGAAAATTGAGAAATGTTGCCGAGGAGATTGGGACAGAAGTTAAGTATCAGAAAGATTTTCTGGAACAGCTGCAAATAACAATGATAAAGGCCCAGGCTGGGGTGAAGAACAACTTAAGAAGATTGAACAAGAGCATAATCCAAAATGGTTCAAACCATATCGTTCACGTGATTGTATTTGCATTAGTCTGTTTCTTTATAGTGTACCTTTGGTCCAAAAGGTCCAGAAAATGA 399 0.4311 MAANSHGGGSSFGHAAPYRSREGLTTRSVAGSNEIQLHIDPMDLDDEISGLRGQVRKLRNVAEEIGTEVKYQKDFLEQLQITMIKAQAGVKNNLRRLNKSIIQNGSNHIVHVIVFALVCFFIVYLWSKRSRK 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0427 132 CDD SNARE_Qc 43 99 - -
Lele04g0427 132 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 38 100 IPR000727 -
Lele04g0427 132 SUPERFAMILY SNARE fusion complex 42 99 - -
Lele04g0427 132 FunFam Bet1-like protein At4g14600 44 102 - -
Lele04g0427 132 Gene3D - 42 100 - -
Lele04g0427 132 PANTHER GOLGI SNARE BET1-RELATED 16 128 IPR039897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0427 Lele-ChrLele04 2522055 2524502 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g1707 27 22431456 22432519 Lele04g0427 04 2522055 2524502 CCT
Lele28g0386 28 2373710 2374784 Lele04g0427 04 2522055 2524502 CCT
Lele02g0419 02 2420286 2424327 Lele04g0427 04 2522055 2524502 hybridization