Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0425 ATGCCAGAAAACGGGGCAGCATCGGAGCGACCGAAGAGGAGCACCAAGAGACTCCTTTTCTTACTAAATTGCTTCTTGCTCTCCCTAGGCACCGCCGGTGGCCCTCTCATAAGTCGTCTCTACTTCCTCCACGGCGGCAAACGCGTCTGGCTATCCAGCTGGCTCCAAACCACCGGCTTCCCTATCTGCCTCCTTCCTCTATCCATCTCTTACATTCGCAGCCGCCTCTCCCACCAACCCAAGCCCTTCGCCTTCATCGACGCTCGCCTTTTTCTTGCAGCCTTTGTCATCGGTGTCTTCACCGGCCTCGATGATTACCTCTATTCTTACGGCTTAGCTCTCCTCCCTGTTTCCACTTCCGCTCTCCTCATCGCCACCCAGCTGGCTTTCACCGCCGCCTTCGCCTTCCTCCTCGTCAGGCAGAAGTTCACCCCTTTCTCCATAAACGCCGTCTTCCTGCTCACCGTTGGAGCCGCTGTCCTGGCTCTTCATTCATCCGGTGATCGTCCCCAAGGTGAGTCCACCAAGCAGTATGTGCTGGGGTTCGTGTTGACTCTGGCGGCGGCGGCCTTGTACGGTTTCTTGTTGCCTCTGATAGAGCTCATGTACAGCAAGAGCAAGCGGCCTTTGACCTACACGCTGGTCATTCAGATTCAGTTCGTGATCAGCTTCGGTGCTACTCTGTTCTGTACCGTTGGGATGCTCGTCAACAACGACTTCAAGGTGATGGGAAGAGAAGCGAGAGAATTTGGGCTGGGGGGAACAAGATATTACGTGGTGCTGGTGTTTAGCGCGATCATGTGGCAGTTCTTCTTTGTGGGAGCTATAGGGGTTATCTTTTGTGCGTCTTCATTGCTCTCAGGCATTATAATCGCCGTGATGCTGCCGTTGACTGAAGTGTTGGCGGTGATTTTCTACAAGGAGAGTTTCACGGCGGAGAAAGGAGTCAGCCTGGGTCTCTCAGTCTGGGGCTTTGTGTCCTACTTCTATGGAGAGTATAAAGTAATCCAGAAGAACAAGCAAACTGATGCCACCCCTCAAACCGAGTTGACGTCAACTATTCCTAATCCATGA 1074 0.5335 MPENGAASERPKRSTKRLLFLLNCFLLSLGTAGGPLISRLYFLHGGKRVWLSSWLQTTGFPICLLPLSISYIRSRLSHQPKPFAFIDARLFLAAFVIGVFTGLDDYLYSYGLALLPVSTSALLIATQLAFTAAFAFLLVRQKFTPFSINAVFLLTVGAAVLALHSSGDRPQGESTKQYVLGFVLTLAAAALYGFLLPLIELMYSKSKRPLTYTLVIQIQFVISFGATLFCTVGMLVNNDFKVMGREAREFGLGGTRYYVVLVFSAIMWQFFFVGAIGVIFCASSLLSGIIIAVMLPLTEVLAVIFYKESFTAEKGVSLGLSVWGFVSYFYGEYKVIQKNKQTDATPQTELTSTIPNP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0425 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 86 166 - -
Lele04g0425 357 Pfam Purine nucleobase transmembrane transport 20 335 - -
Lele04g0425 357 PANTHER OS09G0467300 PROTEIN-RELATED 9 342 IPR030182 GO:0015211|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0425 Lele-ChrLele04 2518355 2519519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0425 30 350 Organic Solute Cotransporters AT1G28230 57.100 1.88e-133 383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g1712 27 22447859 22453014 Lele04g0425 04 2518355 2519519 CCT
Lele25g0374 25 2273714 2281875 Lele04g0425 04 2518355 2519519 CCT
Lele04g0425 04 2518355 2519519 Lele04g0425 04 2518355 2519519 ECH
Lele02g0417 02 2416280 2417444 Lele04g0425 04 2518355 2519519 hybridization