Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0414 ATGGTGGGTTCATGTGGTGGGCTTCCTCTCATCGCAGACTTGAAACTCATCTGTGCGGGTCTCGTTTCTCCTTGTCCCGAGATATGGTGCCTGGTGCCTGGTGCCTGGTGCCTGGTCAGATTTCAGGCGTTGCTTGCTTGTGCAGCTACTCTGTCATCATCCCCGTCTCACCCCACACAATATTTTGTGAACGATAAAGAAGAGAAAATAGATGCAGGCAACAAGCCGGTGGAAGTTACAGAAGTTGAAAATCCTGAGGCTTCTTCTGAGGAATCTGTCGCTGAGAAAATATCCCCTGCACCTGCTAAAGAAAGTAGTGAAGTTGCCCCAGTGACTGAAGAAAGCGGTGAGCCCAATTCTGTTGTTTCTGAAGAGAGCAATGATGTAACTACAGAGCAAAGTAGTGGAAACACTGGAGAAGAAAACTCTGGTGATCAAGAAGCGGCGGAAGAGACTCCACAAATTAAGGTTGGTAGTCCACGCAAATTTAGCTTTGTTCCCAAGGATCATCTGCAACTTGGAAAGGAACTTGATCTTTTTGATTTTGATGCTGCCGCTGATGTATACCCATTGTTTAATATAAGTTCTGTCTCACATGCATCTAATGTACTACTTCCTGTACCAGTCCTTCCATCTTCATCTGTTATATCATATGCTAGGCATGAGACCTACATTGTTGGTCTTCAGATGATAATCACAGTATATTCCATTGATGATAGTGATCAATGCCTCATAGGCACTGCAGAAATTCCTGTTGCGGGCCTTCACATGGATTCTATACTTGCTGAGTCATCATTACCATTGAAATATGTTGCACTTTCTCATTGTTTCCGAACTGAGGCTGGTGCTGCTGGTACTGCGACAAGGGGTCTTTACCGAGTTCACCAGCTCAGCAAGGTTGAGATGTTTATATTTTGCCTCCCTGAGGAGAGTGAACACTACCATGAGGAGCTTATTACAATGGAGGAAGACCTCTTCTTATCCCTAGGTTTACATTATAAAACTTTGGATATGGCCTCTGAAGATTTAGGTGCCCCTGCTCATCGAAAATTTGATGTGGAAGCATGGATGCCCGGCTTAGAACGGTTTGGTGAGCAAGAAGATGGATCTGTTGTCATCCCTGAGCCCCTGAGGCCCTTCGTGGGGGGCCTTGATACCATATCCCCAAAATCTGGATAA 1179 0.4538 MVGSCGGLPLIADLKLICAGLVSPCPEIWCLVPGAWCLVRFQALLACAATLSSSPSHPTQYFVNDKEEKIDAGNKPVEVTEVENPEASSEESVAEKISPAPAKESSEVAPVTEESGEPNSVVSEESNDVTTEQSSGNTGEENSGDQEAAEETPQIKVGSPRKFSFVPKDHLQLGKELDLFDFDAAADVYPLFNISSVSHASNVLLPVPVLPSSSVISYARHETYIVGLQMIITVYSIDDSDQCLIGTAEIPVAGLHMDSILAESSLPLKYVALSHCFRTEAGAAGTATRGLYRVHQLSKVEMFIFCLPEESEHYHEELITMEEDLFLSLGLHYKTLDMASEDLGAPAHRKFDVEAWMPGLERFGEQEDGSVVIPEPLRPFVGGLDTISPKSG 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0414 392 MobiDBLite consensus disorder prediction 62 76 - -
Lele04g0414 392 PRINTS Seryl-tRNA synthetase signature 280 292 IPR002317 GO:0000166|GO:0004828|GO:0005524|GO:0006434
Lele04g0414 392 PRINTS Seryl-tRNA synthetase signature 332 345 IPR002317 GO:0000166|GO:0004828|GO:0005524|GO:0006434
Lele04g0414 392 PRINTS Seryl-tRNA synthetase signature 349 365 IPR002317 GO:0000166|GO:0004828|GO:0005524|GO:0006434
Lele04g0414 392 PRINTS Seryl-tRNA synthetase signature 292 305 IPR002317 GO:0000166|GO:0004828|GO:0005524|GO:0006434
Lele04g0414 392 SUPERFAMILY Class II aaRS and biotin synthetases 152 382 IPR045864 -
Lele04g0414 392 Gene3D Bira Bifunctional Protein; Domain 2 117 367 IPR045864 -
Lele04g0414 392 MobiDBLite consensus disorder prediction 52 161 - -
Lele04g0414 392 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 239 365 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Lele04g0414 392 PANTHER SERYL-TRNA SYNTHETASE 233 365 IPR002317 GO:0000166|GO:0004828|GO:0005524|GO:0006434
Lele04g0414 392 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 208 365 IPR006195 -
Lele04g0414 392 MobiDBLite consensus disorder prediction 112 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0414 Lele-ChrLele04 2452428 2460832 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0414 04 2452428 2460832 Lele28g0387 28 2384780 2385790 CCT
Lele01g0408 01 2396832 2400380 Lele04g0414 04 2452428 2460832 hybridization