Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0413 ATGGATAAAAGCTGCCAATCCTCTGCGGACTCCTCTACTACCTCAGGAGCCACGCCCAGCAGTAGCAATGGCACCATCACTCCCACGAATCTCAGGCACCTCAACAAGCTTTCCCACAAGATCTCCAAGCCCTCTCTTCGAAAACCCTCCTTTGATTCTTCTCTCTCCGAGTCCCAGACCCACATGCCCGATGATCACGGTCAGCCACAACCGGCGGCTCAGGCGCCAGCGCAGCAGCAGAATTTGCAGCATCAGCCTCCTGTCTACAACATCAACAAGAACGACTTCAGGGATGTAGTCCAGAAGCTCACTGGTTCACCTGCTCACGAGCGCATCTCCACTCCGCCTCCTATTCAACAGCCCAAGCCCCCCAGCTCTCGCCTTCAGCGGATACGCCCTCCTCCCCTCGCGCAGATTACCAATGGCCCGCCCCCCTTGCTAGGCGGCGCTGTACCCCGCCCTCAACCGCCTCCGTTTACCGCCGCTTCGGCGTCGACTAGCAACCCCATTAACGCTGGTTATGTCGCTAATTTCTCTGACTTTGTGAGACCGCTTCCACCGTTATCTCCTCTGCCACCTTTTCCGTCCGTCCACGCAGAATCTCCCGTTTCCGCATATATGCGCTATCTCCAGAATTCCACGTCCAACCTGGATTGGAATCCCAAGCAGTTCTCCGGTTTTCCGCCCTTAGCTCCTTTAGTCTCACCTCGCTGGAACAATATGGCTCCACAACAGCCTCAGCCAGAGCCTTAA 753 0.5644 MDKSCQSSADSSTTSGATPSSSNGTITPTNLRHLNKLSHKISKPSLRKPSFDSSLSESQTHMPDDHGQPQPAAQAPAQQQNLQHQPPVYNINKNDFRDVVQKLTGSPAHERISTPPPIQQPKPPSSRLQRIRPPPLAQITNGPPPLLGGAVPRPQPPPFTAASASTSNPINAGYVANFSDFVRPLPPLSPLPPFPSVHAESPVSAYMRYLQNSTSNLDWNPKQFSGFPPLAPLVSPRWNNMAPQQPQPEP 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0413 250 MobiDBLite consensus disorder prediction 47 65 - -
Lele04g0413 250 MobiDBLite consensus disorder prediction 114 130 - -
Lele04g0413 250 MobiDBLite consensus disorder prediction 1 35 - -
Lele04g0413 250 Pfam VQ motif 84 109 IPR008889 -
Lele04g0413 250 MobiDBLite consensus disorder prediction 1 167 - -
Lele04g0413 250 MobiDBLite consensus disorder prediction 137 159 - -
Lele04g0413 250 MobiDBLite consensus disorder prediction 72 90 - -
Lele04g0413 250 PANTHER PROTEIN HAIKU1 29 248 IPR039612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0413 Lele-ChrLele04 2451602 2452354 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0413 04 2451602 2452354 Lele25g0376 25 2289409 2290153 CCT
Lele04g0413 04 2451602 2452354 Lele27g1707 27 22431456 22432519 CCT
Lele04g0413 04 2451602 2452354 Lele28g0386 28 2373710 2374784 CCT
Lele04g0413 04 2451602 2452354 Lele04g0413 04 2451602 2452354 ECH
Lele01g0406 01 2385240 2386842 Lele04g0413 04 2451602 2452354 hybridization
Lele02g0406 02 2363737 2365497 Lele04g0413 04 2451602 2452354 hybridization