Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0411 ATGGCGGCCACTTCCTCGCCTCGCGAAGAGAACGTCTACATGGCCAAGCTTGCCGAGCAGGCCGAGCGCTATGAAGAGATGGTCGAGTTCATGGAGAAAGTCTCCGCCGCCGTCGACAACGAAGAACTTACCGTCGAAGAGAGAAACCTCCTCTCTGTTGCCTACAAAAACGTCATCGGTGCCCGCCGTGCCTCCTGGCGTATCATTTCCTCCATCGAGCAAAAGGAGGAGAGCCGCGGTAACGAGGATCACGTCTCCGTGATCCGTGATTACCGATCTAAGATCGAGACTGAGCTCTCCAACATCTGTGATGGGATCCTGAAGCTTCTCGATTCCCGTCTTATTCCCTCCGCTTCTTCCGGCGATTCAAAGGTCTTTTATCTTAAGATGAAGGGTGATTATCACAGGTACCTTGCGGAGTTCAAGACTGGATCCGAGCGCAAGGATGCTGCTGAGAGCACTCTCACTGCGTACAAAGCTGCTCAGGACATTGCAAATGCCGAGCTGCCTCCCACTCATCCGATTAGGCTTGGCCTGGCGCTGAACTTTTCTGTGTTCTACTATGAGATTCTTAACTCCCCAGACCGCGCTTGCAATCTTGCAAAACAGGCTTTTGACGAAGCAATTGCTGAATTGGATACTTTGGGAGAGGAGTCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGTGATAACCTCACCCTTTGGACCTCCGACATGCAGGATGATGGTGCAGATGAAATTAAAGAAGCGGCACCTAAACAAGATGAAGAAGCTAAGTGA 786 0.5089 MAATSSPREENVYMAKLAEQAERYEEMVEFMEKVSAAVDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIRDYRSKIETELSNICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGSERKDAAESTLTAYKAAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKQDEEAK 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0411 261 Coils Coil 14 34 - -
Lele04g0411 261 PIRSF 14-3-3 2 250 IPR000308 -
Lele04g0411 261 Gene3D - 1 251 IPR036815 -
Lele04g0411 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Lele04g0411 261 PANTHER 14-3-3 PROTEIN 8 242 IPR000308 -
Lele04g0411 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Lele04g0411 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Lele04g0411 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Lele04g0411 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Lele04g0411 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Lele04g0411 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Lele04g0411 261 SMART 1433_4 8 251 IPR023410 -
Lele04g0411 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Lele04g0411 261 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Lele04g0411 261 FunFam 14-3-3 protein epsilon 4 251 - -
Lele04g0411 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0411 Lele-ChrLele04 2446930 2448750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0411 5 259 14-3-3 family AT1G78300 91.797 9.25e-174 477
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0411 04 2446930 2448750 Lele25g0374 25 2273714 2281875 CCT
Lele04g0411 04 2446930 2448750 Lele26g0389 26 2345768 2350798 CCT
Lele04g0411 04 2446930 2448750 Lele28g0384 28 2360061 2365021 CCT
Lele04g0411 04 2446930 2448750 Lele04g0411 04 2446930 2448750 ECH
Lele01g0405 01 2380816 2383120 Lele04g0411 04 2446930 2448750 hybridization
Lele02g0404 02 2358552 2360371 Lele04g0411 04 2446930 2448750 hybridization