Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0377 ATGCAGCTGTCAGCTATTATCCTTCCGTGCTTGCTTCTGCTCTCTGAAGCGGTGGGCCCTGCCGATTTCACTCAGTCGCCGCCTTTTGCTTGTGACTGGTCCAATCCGGCTACCAGATCCTACCCATTCTGCAATCCCAAGCTCAGCGTGTCTCGAAGAGCCCAAGACCTGGTGTCCCGACTCTCATTGGACGAGAAGCTAGCTCAACTCGTGAACGACGCACCTTCTATTCCTCGACTCGGAATCCCAGCGTACCAATGGTGGAATGAGGCTTTACACGGAGTCGCCAACGTCGGACGTGGCATCCGATTCAATGGCTTGATTTCTTCTTCTACTAGCTTCCCTCAAGTCATCCTCTCCGCCGCCACCTTCGACTCCCACCTCTGGTACAGAATCGGTCAGGCCATTGGAGCGGAAGCGAGAGCAATCTATAATGCGGGGCAAGCCACGGGCATGACATTTTGGGCTCCAAACATTAACATCTTCAGGGATCCGAGATGGGGGAGAGGGCAAGAGACGGCCGGCGAAGACCCGCAGGTTACTTCCAAGTACGCTGTGTCGTATGTGAGGGGGGTACAGGGCGATTCCTTCCAGGGAGGCAAACTCAGTGGTCATCTTCAAGCTTCCGCTTGTTGCAAGCATTTCACGGCCTACGATTTGGACAACTGGAAGGGTGTAAATCGCTTCGACTTCGATGCTCGCGTCACTTTGCAAGATTTAGCGGACACATATCAGCCTCCATTTCAGAGTTGCGTAGTGCAAGGACGAGCAAGTGGGATAATGTGCGCTTATAACCGAGTGAATGGGGTTCCAAACTGCGCAGATCACAATCTCCTAACTAAAACCGCCAGAAAACAGTGGGGTTTTCATGGGTACATCACTTCCGATTGTGGCGCAGTCTCACTCCTTCGTGATCATCAAGGATATGCTAGATCAGCGGAGGATGCTGTGGCCGATGTACTTCGGGCTGGAATGGACGTAGAGTGCGGGGATTACTTAACGAAGTATGCTAAATCCGCAGTGGTGCAGAAAAAATTACCAATATCTCAAGTAGATCGTGCACTTCACAACCTGTTCTCAATCAGAATAAGGCTTGGTCTATTCGATGGGAATCCAGCCAAACTGCCCTTCGGCACAATTGGTCCTAATCAAGTGTGTTCAAAAGATCACCAGTATTTGGCTCTTGAAGCTGCCAGAAATGGCATTGTCCTTTTGAAGAACTCTGCCAGACTTCTCCCGCTCCCTAAAACAAAACCCACAATTTCCCTTGCACTCATAGGTCCTAACGCCAATCCTTCCTCTTTAACTCTCCTTGGAAACTATGCGGGCCCTCCCTGTAAACTCGTGGCGCCACTGCAGGCCTTTCAGCACTACGTTAAGGACACCATTTATCACCCTGGTTGTGATGATGGAGCCAAGTGTTCTTCGGCTCAGATTGGCAAAGCCGTGGAAATCGCCACGAAGGTGGATTACGTGGTGCTGATGATGGGATTAGATCAAAGTCAAGAGAGAGAAGATCGTGATCGGGTTCACCTGGACTTGCCTGGCAAGCAGCTGGAACTCATCCACAGCGTCGCTAAAGCTTCCAAGAGGCCAGTCATTTTGGTGATCTTTTCTGGAGGCCCTGTTGATATTTCTTCGGCCAAGTATAACAACAAAGTTGGAGGCATCCTCTGGGCCGGCTATCCCGGAGAAGCTGGAGGAATCGCACTTGCTCAGATTATCTTTGGCGATCACAACCCAGGAGGAAGATTACCGGTGACCTGGTACCCAAAAGATTTCATAAGAGTGCCAATGACAGACATGAGGATGCGAGCTGATCCATCTTCTGGGTATCCTGGAAGGACTTACCGGTTTTACACGGGTCCAAAGGTGTATGCGTTCGGCTATGGCCTGAGCTACTCTAAATATTCGCACGAGTTCGTCTCTGTCACGCGAAACAAGCTTCACTTGAATCAATCGTCGTCTTATTTGATAGTTGAGAATTCAGAAACCATTCGCATCAAATCAGTGTCAGACATGGGTGCAAAATTGTGCGAAAGCATGTCGGTGTCGGTGACGGTGGGAGTTCAAAATAATGGAAGTATGGCGAGTAAGCATTCGGTGTTGCTATTTGCAAGGCATGCAAAACAGAGAATTGGAAATGCGATCAAACAGTTGGTGGGATTTGAGAGTGTGATGTTGGAGGCAGGGGGAAGGGCCGAAGTGGGATTTGAGATAAGCCCCTGTGAGCACCTTAGCAGGGCAAGCGAGGTTGGCACCAAAGTCATTGAAGAAGGGCGCCACCTGTTGACTGTTGGGGATCAAGAGTATCTGATTGATATCATTTTCTGA 2334 0.5009 MQLSAIILPCLLLLSEAVGPADFTQSPPFACDWSNPATRSYPFCNPKLSVSRRAQDLVSRLSLDEKLAQLVNDAPSIPRLGIPAYQWWNEALHGVANVGRGIRFNGLISSSTSFPQVILSAATFDSHLWYRIGQAIGAEARAIYNAGQATGMTFWAPNINIFRDPRWGRGQETAGEDPQVTSKYAVSYVRGVQGDSFQGGKLSGHLQASACCKHFTAYDLDNWKGVNRFDFDARVTLQDLADTYQPPFQSCVVQGRASGIMCAYNRVNGVPNCADHNLLTKTARKQWGFHGYITSDCGAVSLLRDHQGYARSAEDAVADVLRAGMDVECGDYLTKYAKSAVVQKKLPISQVDRALHNLFSIRIRLGLFDGNPAKLPFGTIGPNQVCSKDHQYLALEAARNGIVLLKNSARLLPLPKTKPTISLALIGPNANPSSLTLLGNYAGPPCKLVAPLQAFQHYVKDTIYHPGCDDGAKCSSAQIGKAVEIATKVDYVVLMMGLDQSQEREDRDRVHLDLPGKQLELIHSVAKASKRPVILVIFSGGPVDISSAKYNNKVGGILWAGYPGEAGGIALAQIIFGDHNPGGRLPVTWYPKDFIRVPMTDMRMRADPSSGYPGRTYRFYTGPKVYAFGYGLSYSKYSHEFVSVTRNKLHLNQSSSYLIVENSETIRIKSVSDMGAKLCESMSVSVTVGVQNNGSMASKHSVLLFARHAKQRIGNAIKQLVGFESVMLEAGGRAEVGFEISPCEHLSRASEVGTKVIEEGRHLLTVGDQEYLIDIIF 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0377 777 FunFam probable beta-D-xylosidase 7 53 374 - -
Lele04g0377 777 Gene3D - 53 375 IPR036962 GO:0004553|GO:0005975
Lele04g0377 777 Pfam Fibronectin type III-like domain 701 769 IPR026891 -
Lele04g0377 777 Gene3D - 387 635 IPR036881 GO:0004553|GO:0005975
Lele04g0377 777 Gene3D Immunoglobulins 663 775 IPR013783 -
Lele04g0377 777 FunFam probable beta-D-xylosidase 2 387 635 - -
Lele04g0377 777 SUPERFAMILY (Trans)glycosidases 41 400 IPR017853 -
Lele04g0377 777 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 402 637 IPR036881 GO:0004553|GO:0005975
Lele04g0377 777 SMART Fn3_like_2 700 770 IPR026891 -
Lele04g0377 777 Pfam Glycosyl hydrolase family 3 C-terminal domain 402 634 IPR002772 GO:0004553|GO:0005975
Lele04g0377 777 PRINTS Glycosyl hydrolase family 3 signature 282 300 IPR001764 GO:0004553|GO:0005975
Lele04g0377 777 PRINTS Glycosyl hydrolase family 3 signature 208 224 IPR001764 GO:0004553|GO:0005975
Lele04g0377 777 PRINTS Glycosyl hydrolase family 3 signature 114 133 IPR001764 GO:0004553|GO:0005975
Lele04g0377 777 PANTHER SUGAR HYDROLASE-RELATED 26 772 IPR044993 GO:0009044|GO:0045493
Lele04g0377 777 Pfam Glycosyl hydrolase family 3 N terminal domain 107 358 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0377 Lele-ChrLele04 2228733 2239314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0377 27 770 Glycoside Hydrolase AT1G78060 65.462 0.0 1013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0377 04 2228733 2239314 Lele25g0342 25 2089314 2094486 CCT
Lele04g0377 04 2228733 2239314 Lele26g0360 26 2171766 2176224 CCT
Lele04g0377 04 2228733 2239314 Lele27g1739 27 22646434 22651326 CCT
Lele04g0377 04 2228733 2239314 Lele28g0358 28 2192375 2196859 CCT
Lele04g0377 04 2228733 2239314 Lele04g0377 04 2228733 2239314 ECH
Lele01g0374 01 2170894 2175718 Lele04g0377 04 2228733 2239314 hybridization
Lele02g0369 02 2143236 2150210 Lele04g0377 04 2228733 2239314 hybridization