Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0375 ATGGCTGCTAAAGTCTGTCACCAGGCCATTGGGACTTTTCGGTCTGATTCACTTCTTAGAAATTCTAAAAATCACCAGAATCTTCAGAAGAACTCAATAAGATTGATAGTTAAGGATTTTAGCAGCGGCAATAGCTTCTCAAGGAGAGCTGATCAGAGGAATTGTTTCATAATCCGATCCTTAGCTTCTCAAACATCCGTGGTTGATCCGTTGTTATCCACTTCAAGAAGCAGCACCAGTGACAGTTCCAAGAAATCAAGCTGCGTAGATGTCCCACTAAGCAAGAAGGGCATAGATGAGGCGATTGAAGCTGGCAAAAGGATCAGTAGCATTCCTGTCGATGTCATATTTACATCTGCCCTGATTCGCGCACACATGACAGCCATGCTTGCCATGACCCAGCACCGTCGAGGAAAGGTGCCTATCATCATACACAATGAGAGTGAACAAGCCAGAGCATGGAGCCAAGTTTTTAGTGAAGATACAAAAAAGCAATCCATTCCGGTCATAGCAGCTTGGCAACTAAATGAAAGAATGTATGGAGAGCTACAGGGTCTTAATAAGCAGGAAACAGCTGACAGATATGGGAAAGAACAAGTCCATGAATGGCGCCGAAGTTATGATACACCTCCTCCAAATGGTGAAAGTTTGGAAATGTGTGCTGAAAGGGCAGTTGCTTATTTTAAAGAGCAGATTGAACCCCAACTTTCATCTGGAAAAAATGTTATGATTGCTGCTCATGGGAATTCATTGAGATCCATTATCATGTATCTTGACAAACTAACTTCCCAAGAGGTCATTAGTTTGGAACTATCCACTGGAATTCCCATGCTTTATATTTTCAAAGAAGGAAGATTTATTAGGAGGGGTAGTCCCATAGGACCAACTGAAGCTGGGGTTTATGCCTATACTAGGGGAATGCGTTCTGCATTGTCTGCTGCATCACGTTAG 951 0.428 MAAKVCHQAIGTFRSDSLLRNSKNHQNLQKNSIRLIVKDFSSGNSFSRRADQRNCFIIRSLASQTSVVDPLLSTSRSSTSDSSKKSSCVDVPLSKKGIDEAIEAGKRISSIPVDVIFTSALIRAHMTAMLAMTQHRRGKVPIIIHNESEQARAWSQVFSEDTKKQSIPVIAAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDTPPPNGESLEMCAERAVAYFKEQIEPQLSSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPTEAGVYAYTRGMRSALSAASR 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0375 316 PANTHER PHOSPHOGLYCERATE MUTASE 76 310 IPR005952 GO:0004619|GO:0006096|GO:0016868
Lele04g0375 316 CDD HP_PGM_like 89 288 IPR013078 -
Lele04g0375 316 Pfam Histidine phosphatase superfamily (branch 1) 87 145 IPR013078 -
Lele04g0375 316 Pfam Histidine phosphatase superfamily (branch 1) 164 272 IPR013078 -
Lele04g0375 316 Gene3D - 76 291 IPR029033 -
Lele04g0375 316 SUPERFAMILY Phosphoglycerate mutase-like 87 285 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0375 Lele-ChrLele04 2219180 2222284 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0340 26 2031169 2032701 Lele04g0375 04 2219180 2222284 CCT
Lele27g1760 27 22768952 22771602 Lele04g0375 04 2219180 2222284 CCT
Lele04g0375 04 2219180 2222284 Lele04g0375 04 2219180 2222284 ECH
Lele01g0372 01 2161731 2164339 Lele04g0375 04 2219180 2222284 hybridization
Lele02g0367 02 2131943 2136831 Lele04g0375 04 2219180 2222284 hybridization