Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0370 ATGGCTGGTACCGGGCACGGGAATGGGTTCATAAATGGTATACTACCAAATAGGCACTCTGCTACAATCTCTGTAGTAGACGAGTTCTGCCACGCTCTTGGAGGAGAGAGGCCAATTCATAGCATACTAATTGCAAACAATGGAATGGCTGCAGTCAAGTTTATACGTAGTGTTAGGACCTGGGCCTATGAGACGTTTGGCACAGAGAAGGCTATCTTGTTGGTTGCCATGGCTACTCCAGAGGACATGAGAATCAACGCAGAACACATCCGAATGGCGGATCGATTTGTTGAAGTTCCTGGTGGGACCAATAACAATAACTATGCCAATGTGCAACTCATTGTTGAGGTGGCTGAGATAACTCATGTTGATGCAGTGTGGCCTGGTTGGGGTCATGCATCAGAGAATCCTGAACTGCCAGATGCATTAAATGCAAAAGGAATTGTCTTTCTTGGACCCCCTTCTGTATCTATGGCAGCATTAGGAGATAAAATCGGTTCGTCATTGATTGCTCAAGCAGCAGATGTGCCAACCCTTCCGTGGAGTGGTTCTCATGTGAAGATTCCTCCTGAAAATTCCGTAATTACTATTCCTGATGATATTTACCGACAAGCATGTGTCTATACAACAGAGGAAGCAATTGCTAGTTGTCAAGTTGTAGGTTACCCTGCAATGATTAAGGCCTCTTGGGGTGGTGGTGGTAAAGGCATAAGAAAGGTTCATAATGATGATGAGGTCAGGGCATTGTTCAAGCAAGTTCAAGGGGAAGTTCCAGGCTCTCCTATATTCATAATGAAGTTAGCTTCCCAGAGCCGACATTTGGAAGTCCAGTTACTTTGTGATCAGTATGGAAATGTTGCTGCTTTGCATAGTCGTGATTGCAGTGTTCAAAGGAGGCACCAAAAAATTGTTGAAGAGGGACCGATTACAGTAGCTTCTCTGGATACAGTGAAAAAACTGGAACAGGCAGCCAGAAGATTGGCTAAAAGCGTAAATTATGTTGGTGCAGCTACAGTTGAGTATCTATTCAGCATGGAGACTGGCGAGTACTACTTTTTGGAGCTGAACCCCCGATTACAGGTTGAACATCCTGTTACTGAGTGGATAGCAGAGATAAATCTGCCAGCAGCGCAAGTTGCTGTTGGGATGGGCATCCCTCTCTGGCAAATTCCTGGTATTGTGACAGATAAAATTTATTAGAAAACATCAACATCAGCCACTCCTTTTGATTTTGACAAAGCTGAATCTACAAGGCCAAAAGGGCATTGTGTGGCTGTACGGGTGACAAGTGAGGACCCTGACGATGGTTTTAAGCCTACAAGTGGGAAAGTGCTGGAGCTGAGCTTTAAAAGTAAGCCCAATGTGTGGGCATACTTCTCTGTTAAGTCCGGAGGAGGAATTCATGAATTCTCAGATTCTCAGTTTGGGCATGTTTTTGCATTTGGAGAATCTAGGGCTTTAGCAATTGCAAATATGGTTCTTGGGCTGAAGGAGGTTCAAATTCGGGGAGAAATTCGTACCAATGTTGATTATACTATAGATCTTTTAAATGCTTCAGACTACAGAGAAAACAAAATCCACACGGGATGGTTGGACAGTAGAATTGCGATGAGGGTTAGAGCAGAAAGGCCACCTTGGTATCTCTCTGTTGTTGCAGGGGCTCTCTATAAAGCTTCTGCTAGCAGTGCAGCTTTGGTTTCAGACTATGTTGGCTATCTTGGAAAGGGGCAAATCCCTCCGAAGCACATATCTCTTGTCCACTCTCAAGTGTATTTGAACATTGAAGGAAGCAAATATACGTTGGACGGAAACAGTCATGTGTTATATGCGGAGGAAGAGGCAGCGGGAACTCGTCTTCTAATAGATGGAAGAACTTGCTTGCTTCAGAATGATCATGATCCATCAAAATTAGTTGCAGAGACACCGTGCAAGCTTCTGAGATATTTGGTTACAGATGATAGTCATATTGATGCAGACTCACCATATGCAGAGGTTGAGGTCATGAAGATGTGTATGCCTCTTCTCTCACCTGCTTCTGGAGTTATTCATTTTAAAATGACTGAAGGTCAATCAATGCAGGCTGGTGAACTTATAGCAAAGCTTGATTTAGATGATCCTTCAGCTGTAAGAAAAGCAGAACCTTTTCATGGGAGCTTCCCAGTTTTGGGTCCTCCTACTGCAATTTCTGGCAAGGTTCATCAGAAATGTGCTGCAAGTTCAAATGCAGCACGCATGATTCTGGCTGGCTATGAGCATAATATTGAGGAAGTTGTGCAAAGTTTACTCTATTGCCTTGATAGTCCCGAATTGCCTTTCCTTCAATGGCAAGAGTGCCTGGCTGTTTTGGCAACTCGTCTTCCCAAAGATCTCAAAAATGAGTTGGAATCAAAATACAAAGAGCATGAGAGGATTTCAAGCTCCCAAAATGTTGACTTCCCTGCCAAATTATTGAAGGGAATCCTTGATGTTCATCTTTCTTCCTGTCCTGACAAAGAAAAAGGAGCCCAAGAAAGGCTTGTTGAACCTCTGATGAGTCTGGTGAAGTCTTATGACGGGGGACGGGAGAGCCATGCCCGGATTATTGTTCAATCCCTTTTTGAAGAGTATCTTTCTGTTGAAGAACTATTTAGTGATAACATACAGGCTGATGTAATTGAACGCCTCCGTCTTCAATACAAGAAAGATCTACTGAAGATTGTGGATATAGTGCTCTCTCACCAGGGTGTCAAAAGTAAAAATAAGCTCATACTGCGATTAATGGAACAACTGGTTTACCCTAACCCTGCTGCCTACAGGGATCAATTGATCCGTTTCTCTGCACTCAACCATATAAATTATTCTGAGTTGGCTCTTAAGGCAAGTCAATTGCTGGAACAAACTAAATTGAGCGAACTTCGTTCTAGCATTGCTAGAAGTCTTTCTGAACTAGAGATGTTCACCGAGGACGGTGAAAATATTGATACTCCCAGGAGGAAGAGTGCCATTAATGATAGAATGGAGGACCTTGTGGGTGCTCCTTTGGCAGTTGAAGATGCCCTTGTAGGTTTGTTTGATCACAGTGATCATACTCTTCAAAGGCGGGTTGTGGAAACTTATATTCGCAGGCTGTACCAGCCATATCTTGTCAAAGGGAGTGTTAGGATGCAGTGGCACAGATCTGGTCTTATTGCTTCATGGGAGTTCTTGGAAGAGTACGTGGAAAGGAAGAGTGGAACTGAAGACCAAATGTCTGACAAAGCATCATTGGAGAAACATAGTAAGAGAAAATGGGGAGTGATGGCTATAATTAAATCTCTTCAATTTTTGCCTGCAATAATCAGTGCTGCATTAAGGGAAGCAACACATAACTTTCATGGAGCACTTCCAAATAGTTCTGCTGAACTGGTTGACTATGGTAATATGATGCATATTGCATTGGTAGGCATCAACAATCAGATGAGTTTACTTCAGGACAGTGGTGATGAGGATCAGGCTCAAGAAAGGATCGATAAGTTAGCCAAAATACTCAAGGAAAAGGACGTAGGCTCCACTATTCATACTGCAGGTGTAGGAGTAATTAATTGTATCATACAGAGGGATGAAGGGCGGGCCCCTATGAGGCACTGCTTTTACTGGTCGGCAGAAAAGCTCTATTATGAGGAGGAGCCCTTGTTGCGTCATCTAGAACCTCCCCTATCCATTTATCTTGAATTGGTCAGTTATCGTATGACTTTCATTGCCTGTAATGTTTTAATAGGAATTGAGAGAAACAAAGCTGTCTTGTGCGCTTGTCTTAGACTATTGAATTCTTTCTGGATACAGGACAAACTTAAAGGCTATGATAATATACGGTATACTCCATCCCGAGATCGTCAGTGGCACCTGTACACAGTTCTGGATCATAAGCCTCAACCAATTCAAAGAATGTTTCTCCGAACACTTGTAAGGCAACCGGTTACAAATGATGGATTCTCTACATATCAAGGGCTAGATGCAGAAGCTTCTCGGGCCCAATTGACTATGCCTTTTACTTCAAGGAGCATTTTGAGGTCCTTGATGGCTGCAATGGAGGAGTTGGAACTTAATTCACACAATGCCACTGTCAGACCTGAACATGCTCATATGTACCTCTATATCATACGCGAGCAACAAATTAGTGACCTTTCGCCTCACACAAAGAGAATGGACATAAATGTTGACCAAGAAGAAACGGCAGTTGAGGTAATCTTGGAAGAACTGTCACGTGAAATCCATTCTTTTGTTGGTGTAAGAATGCATAGACTAGGTGTTGCTGAGTGGGAAGTCAAACTCTGGATGGCATCTTCTGGACCAGCAAATGGTGCTTGGAGGATTATTGTAACTAATGTGACTGGCCATACATGCACTGTACATATATACCGAGAACTTGAGGATACCAGCACACACAAAGTGATATACAGTTCAGTCACTGTAAAGGGTCCTCTGCATGGTGTACCAGTTAATGAAAACTATCGACCTTTGGGAGCTATTGACCGAAAACGTCTTGTAGCAAGGAAGACCAACACCACATACTGCTACGATTTTCCACTGGCATTTGAAACAGCTTTGGAACAATCGTGGACAGTCCAATACCCAGGATTTCAAAAGGTTAAAGATAAAGTTCTTCTAAAAGTAACGGAGCTAAAGTTCGCTGACAAGGAGGGCAATTGGGGTACTCCTCTTGTTCCTGTGGAGCGTCCCCCTGGACTTAATGATGTAGGCATGGTAGCCTGGGTAATGGAAATGTGTACTCCTGAGTTCCCAAATGGAAGAACAATCTTAGTTGTAGCAAATGACGTGATCTTTAAGGCTGGTTCCTTTGGCCCAAGAGAGGATGCGTTTTTTCATGCAGTAACTGATCTTGCGTGTAAGAAAAGATTGCCATTGATTTACCTAGCAGCAAATTCTGGTGCCCGTTTAGGTGTAGCTGAGGAAGTCAAAGCTTGTTTTAGAGTTGGTTGGTCTGATGAATCTAACACTGAGCAGGGTTTGCAGTATGTATATTTAACAGCTGAGGATTATGCTAGGATTGGATCATCAGTGATAGCACACGAGCTAAAGCTGGAAAGTGGAGAAACCAGATGGATAATTGATAGCATTGTTGGGAAAGAGGATGGTCTAGGGGTTGAAAACCTAAGTGGCAGTGGAGCCATTGCTAGTGCCTATTCAAGGGCATATAAGGAAACTTTCACCTTGACATACGTGACTGGGAGAACGGTGGGAATAGGGGCTTATCTTGCTAGGCTGGGAATGAGGTGCATACAGAGGCTTGATCAGCCCATTATTCTTACTGGTTTTTCTGCGTTGAACAAACTCCTTGGTCGGGAGGTATACAGTTCTCACATGCAACTTGGTGGGCCTAAGATCATGGCAACAAATGGAGTTGTTCATCTTACTGTGTCAGATGATCTGGAAGGTGTTTCTGCTATTTTGAGGTGGCTCAGCTACATTCCTTCTCATGTAGGCGGCACACTTCCCATGGTACAACCCCAAGATCCTCCAGAAAGACCAGTGGAGTATTTCCCAGAGAACTCATGTGATCCTCGTGCTGCCATCTGTGGTTCTGTGGATAGTAATGGAAAATGGTTGGGTGGGATTTTTGACAAGGAAAGCTTTGTGGAGACGCTAGATGGATGGGCCAGGACAGTTGTTACGGGAAGGGCAAAGCTTGGAGGAATCCCTGTAGGAATTGTTGCTGTTGAGACGCAGACAGTGATGCAAGTTATACCAGCTGATCCAGGTCAGCTTGATTCTCATGAAAGGGTGGTTCCTCAGGCCGGGCAAGTCTGGTTTCCTGATTCTGCAACTAAGACAGCCCAATCAATACTAGATTTCAACAGAGAAGAGCTCCCACTCTTCATTCTTGCAAATTGGAGAGGTTTTTCAGGTGGGCAGAGGGACCTTTTTGAAGGGATTCTTCAAGCTGGATCAAACATTGTGGAGAACCTTCGAACATACAAGCAGCCTGTATTTGTGTATATCCCGATGATGGGTGAACTCCGCGGTGGGGCATGGGTTGTTGTAGACAGCCGAATTAATCCAGACCACATTGAAATGTATGCTGATCGCACAGCTAAAGGGAATGTTCTTGAGCCGGAAGGGATGATAGAGATCAAATTTAGGACAAAGGAATTATTGGAGTGCATGGGTAGACTTGACCAGCAGCTGATAAACCTAAAAGCAAAATTACAGGAAGCCAAGAGTAGCTGGGCTATAGGGACCATTGATTCCCTCCAGCAGCAGATTAAATTCCGGGAGAAACAGCTTTTGCCTGTGTATACGCAGATAGCTACCAAATTTGCTGAATTACATGACACCTCCTTAAGAATGGCTGCAAAGGCTGTAATAAGAGAAGTTCTGGACTGGCGTAACTCCCGCTCTTTCCTGTACCGGAGACTGCGCAGGAGAATTGTTGAGCATTCGCTGATAAACAGTGTCAGAGACGCTGCTGGTGGAGATATGTCTAATATACGTGCAATGGAGTTGATAAAAAATTGGTATTTGAATTCTGATATTGCCAAAGGGAGAGATGATGCGTGGTTGGATGATGAGGCTTTCTTCACATGGAAGAATGAACAGCAGAATTACGAGGATAAATTAAAGGAATTGCGTGCCCAAAAGGTGCTGCTTCAACTGACAAATATTGGCGATTCAGTTTTGGATGTGGAGGCTTTACCTCAAGGTCTTACTGCTCTTTTAAGCAAGTTGGAACCATCAAACCGTGCGAAATTGATTGATGAGCTCCGGAAGGTGCTCGGTTAG 6759 0.4379 MAGTGHGNGFINGILPNRHSATISVVDEFCHALGGERPIHSILIANNGMAAVKFIRSVRTWAYETFGTEKAILLVAMATPEDMRINAEHIRMADRFVEVPGGTNNNNYANVQLIVEVAEITHVDAVWPGWGHASENPELPDALNAKGIVFLGPPSVSMAALGDKIGSSLIAQAADVPTLPWSGSHVKIPPENSVITIPDDIYRQACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPIFIMKLASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIVEEGPITVASLDTVKKLEQAARRLAKSVNYVGAATVEYLFSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIPGIVTDKIYXKTSTSATPFDFDKAESTRPKGHCVAVRVTSEDPDDGFKPTSGKVLELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEVQIRGEIRTNVDYTIDLLNASDYRENKIHTGWLDSRIAMRVRAERPPWYLSVVAGALYKASASSAALVSDYVGYLGKGQIPPKHISLVHSQVYLNIEGSKYTLDGNSHVLYAEEEAAGTRLLIDGRTCLLQNDHDPSKLVAETPCKLLRYLVTDDSHIDADSPYAEVEVMKMCMPLLSPASGVIHFKMTEGQSMQAGELIAKLDLDDPSAVRKAEPFHGSFPVLGPPTAISGKVHQKCAASSNAARMILAGYEHNIEEVVQSLLYCLDSPELPFLQWQECLAVLATRLPKDLKNELESKYKEHERISSSQNVDFPAKLLKGILDVHLSSCPDKEKGAQERLVEPLMSLVKSYDGGRESHARIIVQSLFEEYLSVEELFSDNIQADVIERLRLQYKKDLLKIVDIVLSHQGVKSKNKLILRLMEQLVYPNPAAYRDQLIRFSALNHINYSELALKASQLLEQTKLSELRSSIARSLSELEMFTEDGENIDTPRRKSAINDRMEDLVGAPLAVEDALVGLFDHSDHTLQRRVVETYIRRLYQPYLVKGSVRMQWHRSGLIASWEFLEEYVERKSGTEDQMSDKASLEKHSKRKWGVMAIIKSLQFLPAIISAALREATHNFHGALPNSSAELVDYGNMMHIALVGINNQMSLLQDSGDEDQAQERIDKLAKILKEKDVGSTIHTAGVGVINCIIQRDEGRAPMRHCFYWSAEKLYYEEEPLLRHLEPPLSIYLELVSYRMTFIACNVLIGIERNKAVLCACLRLLNSFWIQDKLKGYDNIRYTPSRDRQWHLYTVLDHKPQPIQRMFLRTLVRQPVTNDGFSTYQGLDAEASRAQLTMPFTSRSILRSLMAAMEELELNSHNATVRPEHAHMYLYIIREQQISDLSPHTKRMDINVDQEETAVEVILEELSREIHSFVGVRMHRLGVAEWEVKLWMASSGPANGAWRIIVTNVTGHTCTVHIYRELEDTSTHKVIYSSVTVKGPLHGVPVNENYRPLGAIDRKRLVARKTNTTYCYDFPLAFETALEQSWTVQYPGFQKVKDKVLLKVTELKFADKEGNWGTPLVPVERPPGLNDVGMVAWVMEMCTPEFPNGRTILVVANDVIFKAGSFGPREDAFFHAVTDLACKKRLPLIYLAANSGARLGVAEEVKACFRVGWSDESNTEQGLQYVYLTAEDYARIGSSVIAHELKLESGETRWIIDSIVGKEDGLGVENLSGSGAIASAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGGPKIMATNGVVHLTVSDDLEGVSAILRWLSYIPSHVGGTLPMVQPQDPPERPVEYFPENSCDPRAAICGSVDSNGKWLGGIFDKESFVETLDGWARTVVTGRAKLGGIPVGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPDSATKTAQSILDFNREELPLFILANWRGFSGGQRDLFEGILQAGSNIVENLRTYKQPVFVYIPMMGELRGGAWVVVDSRINPDHIEMYADRTAKGNVLEPEGMIEIKFRTKELLECMGRLDQQLINLKAKLQEAKSSWAIGTIDSLQQQIKFREKQLLPVYTQIATKFAELHDTSLRMAAKAVIREVLDWRNSRSFLYRRLRRRIVEHSLINSVRDAAGGDMSNIRAMELIKNWYLNSDIAKGRDDAWLDDEAFFTWKNEQQNYEDKLKELRAQKVLLQLTNIGDSVLDVEALPQGLTALLSKLEPSNRAKLIDELRKVLG 2252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0370 2252 Pfam Biotin carboxylase C-terminal domain 426 532 IPR005482 -
Lele04g0370 2252 FunFam acetyl-CoA carboxylase isoform X2 14 163 - -
Lele04g0370 2252 Pfam Carboxyl transferase domain 1584 2136 IPR034733 -
Lele04g0370 2252 Gene3D - 206 268 IPR013815 GO:0005524
Lele04g0370 2252 SUPERFAMILY Rudiment single hybrid motif 420 533 IPR011054 -
Lele04g0370 2252 ProSiteProfiles Biotin carboxylation domain profile. 38 536 IPR011764 -
Lele04g0370 2252 SUPERFAMILY ClpP/crotonase 1494 1818 IPR029045 -
Lele04g0370 2252 ProSiteProfiles Biotinyl/lipoyl domain profile. 628 702 IPR000089 -
Lele04g0370 2252 CDD biotinyl_domain 637 701 - -
Lele04g0370 2252 ProSiteProfiles ATP-grasp fold profile. 191 383 IPR011761 GO:0005524|GO:0046872
Lele04g0370 2252 PANTHER ACETYL-COA CARBOXYLASE, ISOFORM A 600 2250 - -
Lele04g0370 2252 SMART Biotin_carb_C_2 425 532 IPR005482 -
Lele04g0370 2252 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 162 392 - -
Lele04g0370 2252 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. 1489 1828 IPR011762 -
Lele04g0370 2252 Pfam Biotin carboxylase, N-terminal domain 39 158 IPR005481 -
Lele04g0370 2252 SUPERFAMILY Single hybrid motif 634 704 IPR011053 -
Lele04g0370 2252 Coils Coil 2185 2212 - -
Lele04g0370 2252 Gene3D - 164 205 - -
Lele04g0370 2252 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. 1832 2147 IPR011763 GO:0016874
Lele04g0370 2252 ProSitePatterns Carbamoyl-phosphate synthase subdomain signature 2. 352 359 IPR005479 GO:0005524
Lele04g0370 2252 SUPERFAMILY PreATP-grasp domain 18 161 IPR016185 -
Lele04g0370 2252 Pfam Acetyl-CoA carboxylase, central region 1269 1482 IPR013537 GO:0003989|GO:0005524|GO:0006633
Lele04g0370 2252 Pfam Acetyl-CoA carboxylase, central region 702 1232 IPR013537 GO:0003989|GO:0005524|GO:0006633
Lele04g0370 2252 SUPERFAMILY ClpP/crotonase 1823 2213 IPR029045 -
Lele04g0370 2252 Gene3D - 1822 2222 - -
Lele04g0370 2252 Gene3D - 1490 1817 - -
Lele04g0370 2252 FunFam acetyl-CoA carboxylase isoform X1 182 267 - -
Lele04g0370 2252 FunFam Acetyl-CoA carboxylase 1 632 703 - -
Lele04g0370 2252 Coils Coil 2048 2068 - -
Lele04g0370 2252 Gene3D - 269 518 - -
Lele04g0370 2252 Pfam Biotin-requiring enzyme 636 701 IPR000089 -
Lele04g0370 2252 Gene3D - 12 163 - -
Lele04g0370 2252 FunFam acetyl-CoA carboxylase isoform X2 1822 2222 - -
Lele04g0370 2252 Gene3D - 632 703 - -
Lele04g0370 2252 FunFam acetyl-CoA carboxylase 1-like 269 518 - -
Lele04g0370 2252 Pfam Carbamoyl-phosphate synthase L chain, ATP binding domain 206 388 IPR005479 GO:0005524
Lele04g0370 2252 Gene3D Biotin dependent carboxylase carboxyltransferase 1640 1704 - -
Lele04g0370 2252 Coils Coil 1342 1362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0370 Lele-ChrLele04 2182864 2195329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0370 1 2252 Acyl Lipid Metabolism Gene Families AT1G36160 77.251 0.0 3658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0370 04 2182864 2195329 Lele25g0336 25 2045115 2046978 CCT
Lele04g0370 04 2182864 2195329 Lele26g0353 26 2124665 2126556 CCT
Lele04g0370 04 2182864 2195329 Lele27g1747 27 22700034 22701896 CCT
Lele04g0370 04 2182864 2195329 Lele28g0352 28 2143541 2145360 CCT
Lele04g0370 04 2182864 2195329 Lele04g0370 04 2182864 2195329 ECH
Lele01g0368 01 2127940 2140654 Lele04g0370 04 2182864 2195329 hybridization
Lele02g0362 02 2098539 2111002 Lele04g0370 04 2182864 2195329 hybridization