Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0367 ATGGGGGAACCGGCTGATGAAACCCATAAAACAAAAGAGATAGATGCTAGAAGTGTGTCATCTTCACAGGGCCAGGCACCACACCCTCACAAAGTGGGAATTCCTCCGAGACAGAACTTGTTCAAGGAATTCCAATCCCTCGTCAAAGAAACATTCTTTGCTGATGATCCTCTACGCTCTTTCAAAGACCAGACTAAATTCCGGAAATTCATCCTTGGCATTGAGGCCGTATTCCCAATACTTAAATGGGGCAGAAATTACAATGCTGTCAAATTCAGAGGGGATCTCATAGCTGGTCTAACTATTGCAAGTCTCTGCATTCCTCAGGATATTGGATATGCAAAGCTTGCAAATTTGGCTCCACAGTACGGGCTGTATTCCAGCTTTGTTCCCCCTCTGATTTATGCTATCATGGGTAGTTCTCGTGATATTGCCATAGGACCTGTGGCAGTGGTTTCTCTCTTGCTAGGAACCTTACTTGAGAATGAGATTGATCCTATTGAACATCCATCTGAATATCGAAGCCTTGCTTTCACAGCTACTTTTTTTGCTGGCATTACTCAAGCAACTCTTGGGGTCTTCAGGTTAGGTTTTTTGATCGATTTCCTCTCCCATGCTGCTATTGTCGGTTTTATGGCTGGAGCTGCTATCACCATTGCCCTTCAACAGCTTAAGGGTTTCCTTGGCATTAAAAAGTTCACAAAGAAAACCGATGTTGTGTCTGTGTTGCATTCAGTATTCTCAACAGCCCATCATGGTTGGAACTGGCAGACTATAGTTCTAGGAGCAAGCTTTTTGGTTTTTCTGCTGATTGCAAGATATATCGGCAAAAGGAACAAGAAATTCTTCTGGGTGCCAGCTATCGCCCCGTTGATATCTGTTGTTCTCTCCACTTTAATTGTGTTCGTAACCCGTGCAGACAAGCAAGGTGTTGAAATTGTAAAACACATAAAGAAGGGGATCAATCCTTCATCAGTTAAAGAGATATATTTTAGTGGTGATTTCCTTGGGAAAGGTTTCAAGATTGGCATTGTGGCTGGCATGATAGCATTGACAGAAGCCACAGCAATAGGAAGAACATTTGCTTCTATGAAGGATTATCATTTGGATGGAAATAAGGAAATGACAGCATTAGGAGCTATGAATATTGTTGGTTCAATGACTTCCTGCTATGTAGCAACAGGTTCTTTTTCTCGGTCAGCGGTGAATTACATGGCTGGCTCCCAAACTGCAGTCTCAAATATCATTATGTCCATTGTTGTGTTCTTAACCCTTCAATTCATTACACCTCTCTTCAAGTATACCCCAAATGCCATTCTTTCTTCCATCATCATATCTGCTGTAATTGGCCTCGTGGACTATCATGCAGCAATTTTAATTTGGAAGATTGATAAGTTTGATTTTATTGCTTGCATGGGAGCCTTCTTTGGGGTTGTTTTTGTCTCAGTTGAGATAGGACTTTTAATTGCTGTCACTATATCCTTTGCTAAAATCCTATTACAAGTTACCAGACCGCGAACTGCTATTCTGGGGAAGATTCCTGGGACAACTGTCTATAGAAATACCCAACAATACCCAGAGGCCACAAAGGTTCCTGGTGTGCTGGTCGTAAGAATTGACTCTGCCATATACTTTTCCAACTCCAATTATGTTAAAGAAAGGATATTGAGATGGCTGATGGATGAGGAAGAAAGAGTGAAAAGAGACTACCAAACACAAGTCAAATTTTTGATAGTCGAAATGTCGCCGGTTACTGACATTGATACCAGTGGCATTCATGCCTTTGAAGAGTTATACAGAAGTCTTCAAAAGAGGGATGTTCAGCTTGTTCTAGCAAACCCTGGTTCAGTAGTGATAAACAAGCTTCACACATCTGATTTCGCAAATCTGATCGGCGAGGACAACATCTACCTCACAGTTGCAGATGCTGTTGCATACTGTTCTTCAAAGCTAGCAGAAGAGCCTTGA 1968 0.4182 MGEPADETHKTKEIDARSVSSSQGQAPHPHKVGIPPRQNLFKEFQSLVKETFFADDPLRSFKDQTKFRKFILGIEAVFPILKWGRNYNAVKFRGDLIAGLTIASLCIPQDIGYAKLANLAPQYGLYSSFVPPLIYAIMGSSRDIAIGPVAVVSLLLGTLLENEIDPIEHPSEYRSLAFTATFFAGITQATLGVFRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGFLGIKKFTKKTDVVSVLHSVFSTAHHGWNWQTIVLGASFLVFLLIARYIGKRNKKFFWVPAIAPLISVVLSTLIVFVTRADKQGVEIVKHIKKGINPSSVKEIYFSGDFLGKGFKIGIVAGMIALTEATAIGRTFASMKDYHLDGNKEMTALGAMNIVGSMTSCYVATGSFSRSAVNYMAGSQTAVSNIIMSIVVFLTLQFITPLFKYTPNAILSSIIISAVIGLVDYHAAILIWKIDKFDFIACMGAFFGVVFVSVEIGLLIAVTISFAKILLQVTRPRTAILGKIPGTTVYRNTQQYPEATKVPGVLVVRIDSAIYFSNSNYVKERILRWLMDEEERVKRDYQTQVKFLIVEMSPVTDIDTSGIHAFEELYRSLQKRDVQLVLANPGSVVINKLHTSDFANLIGEDNIYLTVADAVAYCSSKLAEEP 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0367 655 ProSiteProfiles STAS domain profile. 524 647 IPR002645 -
Lele04g0367 655 FunFam Sulfate transporter 31 504 650 - -
Lele04g0367 655 Pfam STAS domain 525 643 IPR002645 -
Lele04g0367 655 PANTHER SULFATE TRANSPORTER 38 648 IPR001902 GO:0016020|GO:0055085
Lele04g0367 655 MobiDBLite consensus disorder prediction 1 34 - -
Lele04g0367 655 Gene3D STAS domain 504 652 IPR036513 -
Lele04g0367 655 MobiDBLite consensus disorder prediction 1 16 - -
Lele04g0367 655 CDD STAS_SulP_like_sulfate_transporter 525 640 - -
Lele04g0367 655 Pfam Sulfate permease family 92 472 IPR011547 GO:0016020
Lele04g0367 655 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
Lele04g0367 655 TIGRFAM sulP: sulfate permease 79 643 IPR001902 GO:0016020|GO:0055085
Lele04g0367 655 SUPERFAMILY SpoIIaa-like 526 648 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0367 Lele-ChrLele04 2173145 2176492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0367 2 654 Inorganic Solute Cotransporters AT1G22150 74.426 0.0 983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0331 26 1988675 1991670 Lele04g0367 04 2173145 2176492 CCT
Lele27g1767 27 22810456 22813456 Lele04g0367 04 2173145 2176492 CCT
Lele28g0333 28 2011177 2014160 Lele04g0367 04 2173145 2176492 CCT
Lele04g0367 04 2173145 2176492 Lele04g0367 04 2173145 2176492 ECH
Lele01g0366 01 2118531 2121885 Lele04g0367 04 2173145 2176492 hybridization