Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0361 ATGGAAAAGAAAGAGTTAGTGGAGGCAATCGAATCAAATTCTCGTGCTGTTGAAAAGCTGGAAGATGTTCCCACTGTCCACAATGAAAAGGCCAAACCGCCAGAAGAGGTAAAAAGTCAAAATATTGGCAGTAATGATCTCGCGTCAGACAATAGACAAGATGATGTATCTGACAAGACAAAAGAGAAGGCAGATGAGCATGAGAGTAATGTCATGAAGACAGAAACTGAAGATGAATCCTTCAATAATGTTGGACAAAATTCCTCCGATGATAATGTTGATGGCAGCAAAGAGTCCGAGTTTACCAGCCAAGGAGGAATTGTAGATGTACTTTCTGGACAAAATGACTTGGCCAGAGAGATGAGCGAGAGTGGGAATGTGGAATCCACACAAATGAATCATAAGATAGATGAAATTCCAAGTGAGGACGATAATCTAGAGCCCGTGTTTGACGGAACTGAGGTTTCTGGTATGGAAGCTAACAGAAGCACAGATAACAGTTCTTTAGACGTGGTTGAGAAAGCTGTGGCACTTAAAAATTTTGTTAGGGAGAGAAGTGTTGTAGCTGTCTCTACTGTGCTACGTCGCCTTTCTGGAAAAGGTGATGAAGGTTCCATGAGCAATTTTGATGATGAAAGTAAGAATGCTTCTGAATCCTCAAATGTGGATTCTAGTGAGAAAAAATCTTGGAACCCCCTAAATTATATTAGGATGTCATTCGAAGCTGAGTCGGAAGGCAAAAATGAATGTAGGGAACCAATAACTGGAGGTCCTCAATATCCCATAGCCATGAAAGGAAAGATTATACTCTACACAAGACTAGGGTGCCAGGAATCTAAAAAAGTTAGGCTATTTTTGTATATGAAACGGCTTAGGTATGTTGAAATCAATATTGACGTGTACCCCAGTAGAAAGCAGGAGCTTGACAGGATTTCTGGATCTACTTCTATTCCCAAGGTATTTTTCAATGAAATACTTATTGGAGGTTTGAATGAGCTAAAGGCCCTGGATGAATCTGGTAAGCTTGATGAGAAGATTGAATTTCTCATTACTGAAGCGCCGTCAATTGAAGCTCCGTTACCGCCTCTTTCCGGAGAGGATGATGAGTCTAGTAATGGAGCTCTCGATGAAATGGCTTTAATTGTCAGCAAAATGAAAGAGTTTATTGTTGTGAAAGATCGATTTTACAAAATGCGGAGGTTCACAAACTGTTTTCTTGGCTCAGAAGCTGTGGACTTCTTATCAGAAGATCAATACTTGGAAAGACAGGAGGCTGTTGAGTTTGCACGACATCTTGCTAGCAAATTCTTCTTCCAGCATGTTCTTGATGAGAATCTATTCGAGGATGGTAACCACTTGTACCGTTTTTTGGACGATGACCCGGTTGTGGCTTCTCAATGTCGCAATATTCCGAGGGGCATAACCACTGTGAAGCCAAAGTCTATAATAGAAATCGCATCAAGGCTGAGGTTTTTGTCTCATGCAATATTTGAAGCCTATGTTTCTGAAGATGGACATCATGTTAATTACAGAAGTCTCCATGGGAGCGAGGAGTTTGTGAGGTATCTGAGAATAGTAGAGGAGCTCCAAAGAGTGGAAATATGGGATATGTCTAGAGAAGATAAGCTAGCTTTCTTTATCAATCTTTACAATATGATGGCCATTCATGCAATCTTAGAATGGGGCCATCCAGCTGGAGCACTGGAAAGAAGAAAATTGTTTGGAGACTTCAAATATGTGATTGGTGGGTCCACTTACTCACTTTCAGCCATTCAAAATGGCATTTTAAGGGGAAACCAGCGGCCACCATACAATCTTATGAAGCCATTTGGTGCAAAAGATAAACGTGCGAGGGTGGCTCTTCCTTGCCCTGAGCCTCTTATTCATTTTGCTTTAGTATGCGGTACCAGATCTGGGCCTGCCCTTAGATGCTATTCTCCTCGAGATATTGACAAAGAATTAATGGACTCAGCTCGCAATTTCTTGAGAAGTGGAGGACTTCTCATTGATTTGAATACGAAGGTTGCATATGCTAGTAAGATCCTTAAGTGGTTTAGTATAGATTTTGGCAAGAACGATGCAGAGGTACTGAGGCATGTGTCAAACTACTTAGATCCAGCTGACGCAGCAGTATTGTTGGATCTGCTTGCCACTTCTGAATTGAAGGTGATTCATGTCCCTTATGATTGGGGTTTAAACTACTAA 2205 0.4118 MEKKELVEAIESNSRAVEKLEDVPTVHNEKAKPPEEVKSQNIGSNDLASDNRQDDVSDKTKEKADEHESNVMKTETEDESFNNVGQNSSDDNVDGSKESEFTSQGGIVDVLSGQNDLAREMSESGNVESTQMNHKIDEIPSEDDNLEPVFDGTEVSGMEANRSTDNSSLDVVEKAVALKNFVRERSVVAVSTVLRRLSGKGDEGSMSNFDDESKNASESSNVDSSEKKSWNPLNYIRMSFEAESEGKNECREPITGGPQYPIAMKGKIILYTRLGCQESKKVRLFLYMKRLRYVEINIDVYPSRKQELDRISGSTSIPKVFFNEILIGGLNELKALDESGKLDEKIEFLITEAPSIEAPLPPLSGEDDESSNGALDEMALIVSKMKEFIVVKDRFYKMRRFTNCFLGSEAVDFLSEDQYLERQEAVEFARHLASKFFFQHVLDENLFEDGNHLYRFLDDDPVVASQCRNIPRGITTVKPKSIIEIASRLRFLSHAIFEAYVSEDGHHVNYRSLHGSEEFVRYLRIVEELQRVEIWDMSREDKLAFFINLYNMMAIHAILEWGHPAGALERRKLFGDFKYVIGGSTYSLSAIQNGILRGNQRPPYNLMKPFGAKDKRARVALPCPEPLIHFALVCGTRSGPALRCYSPRDIDKELMDSARNFLRSGGLLIDLNTKVAYASKILKWFSIDFGKNDAEVLRHVSNYLDPADAAVLLDLLATSELKVIHVPYDWGLNY 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0361 734 MobiDBLite consensus disorder prediction 200 228 - -
Lele04g0361 734 SUPERFAMILY Thioredoxin-like 265 347 IPR036249 -
Lele04g0361 734 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 21 733 - -
Lele04g0361 734 SMART DEP_3 385 458 IPR000591 GO:0035556
Lele04g0361 734 Gene3D - 377 509 IPR036388 -
Lele04g0361 734 Coils Coil 3 23 - -
Lele04g0361 734 Pfam Protein of unknown function, DUF547 536 662 IPR006869 -
Lele04g0361 734 ProSiteProfiles DEP domain profile. 385 458 IPR000591 GO:0035556
Lele04g0361 734 SUPERFAMILY "Winged helix" DNA-binding domain 386 466 IPR036390 -
Lele04g0361 734 MobiDBLite consensus disorder prediction 121 146 - -
Lele04g0361 734 ProSiteProfiles Glutaredoxin domain profile. 256 353 - -
Lele04g0361 734 MobiDBLite consensus disorder prediction 210 228 - -
Lele04g0361 734 MobiDBLite consensus disorder prediction 1 108 - -
Lele04g0361 734 Gene3D Glutaredoxin 263 348 - -
Lele04g0361 734 CDD DEP 381 455 - -
Lele04g0361 734 Pfam Glutaredoxin 268 324 IPR002109 -
Lele04g0361 734 MobiDBLite consensus disorder prediction 1 36 - -
Lele04g0361 734 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 390 456 IPR000591 GO:0035556
Lele04g0361 734 Coils Coil 57 77 - -
Lele04g0361 734 MobiDBLite consensus disorder prediction 51 75 - -
Lele04g0361 734 MobiDBLite consensus disorder prediction 76 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0361 Lele-ChrLele04 2143867 2147477 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0319 26 1906138 1916298 Lele04g0361 04 2143867 2147477 CCT
Lele28g0320 28 1930775 1939915 Lele04g0361 04 2143867 2147477 CCT
Lele04g0361 04 2143867 2147477 Lele04g0361 04 2143867 2147477 ECH
Lele01g0361 01 2093193 2096854 Lele04g0361 04 2143867 2147477 hybridization
Lele02g0354 02 2048478 2052118 Lele04g0361 04 2143867 2147477 hybridization