Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0359 ATGAGTTCTACATCAACCCAACTTGTCATCTCAAAAAGGATGGGCATATACGAACCATTCCAGCAAGTGAGCATGTGGGCGGACAACTTTAAAGTTGAAAATAGCCTAAATTCAGGTCCTTCCCAGATATTCATGGTGAACCCTACTACAGAGCCCAAGGCTGAATATATTCCTCATGAATCAACGGGAGCCTCAGGAGATGATCAAGAGACCAACAATGCTGTTAGCAAGGTGCTTAGACGCCTGGCACAAAATCGCGAAGCAGCTCGAAAAAGTCGTCAAAGGAAAAAGGCTTATGTCCAACAATTAGAAACAAGCCGTCTGAAGCTCATGCAACTGGAGCTAGAGATTGAGAAAGCGAAAAAGCAGGGTATGTATATGGGCGGAGCATTAGATGCCACTTACACAGGATCACCTGGAACAATCAACCCAGGGATTGCAACTTTTGAGATGGAATATAGTCATTGGGTTGAAGAGCAACACACACAGAATGCAGAACTTAGAAACGTATTGCAAACGCAGTCATCTGATGTGCAGCTTCATCTGCTGGTTGAGAGTGGCTTGAATCATTACTCAAATCTTTTCAGGATGAAAGCTGACGCTGCAAAAGCTGATGTCTTCTACTTAATCTCCGGAGTGTGGAAGGCATCTGTTGAACGCCTCTTCCTCTGGATTGGTGGATCCCGCCCGTCTCAGCTTCTTAATATCATCGTGCCACAGGTGGAGGATTTGACGGATCAACAGAAAGCGAGTTGCACCAAACTCCGGCAATCTTCTCAGCAAGCTGAAGATGCTCTTTCACAAGGACTGGATAAACTACAGCAGAATCTGGTCTTTAACATGGGAGCCAATGGATTGGACATGGGAAGCTTCGGGTTTCAGATGACTTCTGCCATGGAGACAATTGAAGCACTAGAGGGTTTTGTAAGCCAGGCAGACCATCTTCGACAACAAACGTTGCAGCATATGTCTCGGATCCTGACGCCCCGACAAGCAGCTCAAGGGTTGCTGATCTTAGGCGAATACTTTCAGCGTCTTCGTGCTCTGAGTTCTCTTTGGTCAGCTCGTCCATGCGATCCTGCATTCCAAGCTTGA 1095 0.4648 MSSTSTQLVISKRMGIYEPFQQVSMWADNFKVENSLNSGPSQIFMVNPTTEPKAEYIPHESTGASGDDQETNNAVSKVLRRLAQNREAARKSRQRKKAYVQQLETSRLKLMQLELEIEKAKKQGMYMGGALDATYTGSPGTINPGIATFEMEYSHWVEEQHTQNAELRNVLQTQSSDVQLHLLVESGLNHYSNLFRMKADAAKADVFYLISGVWKASVERLFLWIGGSRPSQLLNIIVPQVEDLTDQQKASCTKLRQSSQQAEDALSQGLDKLQQNLVFNMGANGLDMGSFGFQMTSAMETIEALEGFVSQADHLRQQTLQHMSRILTPRQAAQGLLILGEYFQRLRALSSLWSARPCDPAFQA 364
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0359 364 Pfam Seed dormancy control 165 238 IPR025422 GO:0006351|GO:0043565
Lele04g0359 364 ProSiteProfiles DOG1 domain profile. 146 356 IPR025422 GO:0006351|GO:0043565
Lele04g0359 364 Pfam bZIP transcription factor 77 109 IPR004827 GO:0003700|GO:0006355
Lele04g0359 364 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 80 95 IPR004827 GO:0003700|GO:0006355
Lele04g0359 364 SUPERFAMILY Leucine zipper domain 77 110 IPR046347 GO:0003700|GO:0006355
Lele04g0359 364 PANTHER TRANSCRIPTION FACTOR TGA9 1 358 - -
Lele04g0359 364 Gene3D - 76 126 - -
Lele04g0359 364 SMART brlzneu 73 133 IPR004827 GO:0003700|GO:0006355
Lele04g0359 364 Coils Coil 96 123 - -
Lele04g0359 364 FunFam BZIP family transcription factor 76 125 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele04g0359 Lele-ChrLele04 2121719 2123990 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0359 2 360 Calmodulin-binding Proteins AT1G77920 55.348 7.07e-136 390
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele04g0359 DOG1 1.6e-25 No_clan
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0359 04 2121719 2123990 Lele04g0359 04 2121719 2123990 ECH
Lele01g0357 01 2072861 2075100 Lele04g0359 04 2121719 2123990 hybridization
Lele02g0352 02 2022538 2024812 Lele04g0359 04 2121719 2123990 hybridization