Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0354 ATGCGTCCTTCAAAGTCACGTCAAGTTCATCCCAACCCGGTTCAGGGGGGCCGTCTAGACCCTAAAATCTGGCGAGCGTGCGCCGGTGGATGTTTTCGAATCCCTCCTCTTCAGTCTAGGGTTTATTACTTCCCTCAGGGCCATATCGAGCATGCCTCGTCGGCTCCTCTATACCTTAACCCTCTAATCTTCTACAGGCCCCTGATTCTCTGTCGCGTCTCCGCTGTTGAATTTCTTGCTGACCCTGTAGCCGATGAGGTATTTGCCAAGATTTCGCTCCTTCCTTTGAGTGATGGCAACTCTGATCACTGTGCCGATTCCGTGGAAGCGCCGGACGATGACAAGATTGTGTCATTTGCGAAGGTTCTGACGCCTTCTGACGCGAACAATGGCGGTGGATTCTCTGTTCCTAGGTACTGTGCTGACTCCATCTTTCCGCCTTTGAACTTCCAGGTCGACCGACCCACCCAGACATTGTACGTGACGGATGTTCACGGTAACGTCTGGGAGTTTCGCCACATTTATCGGGGCACACCAAAGCGGCACTTGCTCACTACTGGGTGGAGTAAGTTTGTCAATAGCAAGAAGTTGGTTGCTGGTGACTCGGTGGTTTTCATGAAGAATTCTGGGGGGATGATGTTCGTCGGGATTCGCAGAACTTTGCGATTCGCTAAATTAACTACCGTCGATTGCTCCATATTGTCTTCCCAGCTTGGTGGGGTGAGAAATAAGCCTGAGGGGGAGCAGCAGCAAGAGGGCTATTTAGGTAGGAAAGATGGATTTTCAAGGAACGGGAAGGGGAAATTGTCGGCTAAGGAAGTTGCTGATGCTGCAGATTTGGCAGCGCAAAGCATGCCATTTGAGGTTGTTTATTATCCAAGGGCGGGCTGGTCGGACTTTGTGGTGAAGGCGGAAGTTGTGGAGAAAGCTTTGAATGTCGCATGGACTACCGGAATGAGAATTAAAATGGCAATGGAGACTGAGGATTCTTCCAGGATCACATGGTTTCAGGGGACAATATCTTCTGCGTCTGCTCCTGATAATGGGCTTTGGCGGGGTTCTCCATGGCGTATGCTTCAGGTTATGTGGGATGAACCTGACGTCTTGCGGAATGCAAAGCGAGTGAGCCCCTGGGAGGTTGAACTTGTTTCCTCTGTTCTTCCCCCTGATGCAGTATTCCCTCCTGCCAAAAGGTTTAGAGCTGCTCAGTATTGTGGGGTGGCAACCGATAGGGAGGGAGACCCCTTCTTTACTATGACAGGTTTGACTAATTCAACAATGGGGCACTTGAACCAATCATTGTTGAATTACAATACTGTTGTTCCTGCTGGCATGCAGGGAGCCAGGCAAGATCTATCTTCAGTATCAAGTCTCTCCAACTTTGGAATTGGTAATTCTCATCTGTACATTGGTAATACATTTGGAAACATGGTACCCAGGATGAAAACTTTTATGTCAACAGAACCAAATATTGACAGTTCTCAGTCTAATAGCTTGTCACCAGAAAGCCACAGTAGTTTGCAGGGCTCTGGCACAGAATTTGCTGGGACACGAGGCTGCAACTTAACAAAACAGGGTGCAAGTTCAATTCAGCTATTCGGTAAGCTCATTCAATTGGAACAGCCCGTTGAAAATGATGAGGGTAGTAATGGCTGCAATGAGACTGAAGGCGTTGACTAG 1680 0.4881 MRPSKSRQVHPNPVQGGRLDPKIWRACAGGCFRIPPLQSRVYYFPQGHIEHASSAPLYLNPLIFYRPLILCRVSAVEFLADPVADEVFAKISLLPLSDGNSDHCADSVEAPDDDKIVSFAKVLTPSDANNGGGFSVPRYCADSIFPPLNFQVDRPTQTLYVTDVHGNVWEFRHIYRGTPKRHLLTTGWSKFVNSKKLVAGDSVVFMKNSGGMMFVGIRRTLRFAKLTTVDCSILSSQLGGVRNKPEGEQQQEGYLGRKDGFSRNGKGKLSAKEVADAADLAAQSMPFEVVYYPRAGWSDFVVKAEVVEKALNVAWTTGMRIKMAMETEDSSRITWFQGTISSASAPDNGLWRGSPWRMLQVMWDEPDVLRNAKRVSPWEVELVSSVLPPDAVFPPAKRFRAAQYCGVATDREGDPFFTMTGLTNSTMGHLNQSLLNYNTVVPAGMQGARQDLSSVSSLSNFGIGNSHLYIGNTFGNMVPRMKTFMSTEPNIDSSQSNSLSPESHSSLQGSGTEFAGTRGCNLTKQGASSIQLFGKLIQLEQPVENDEGSNGCNETEGVD 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0354 559 Pfam Auxin response factor 277 360 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele04g0354 559 Pfam B3 DNA binding domain 119 219 IPR003340 GO:0003677
Lele04g0354 559 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 19 542 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele04g0354 559 SMART B3_2 119 221 IPR003340 GO:0003677
Lele04g0354 559 Gene3D - 315 387 - -
Lele04g0354 559 ProSiteProfiles B3 DNA-binding domain profile. 119 221 IPR003340 GO:0003677
Lele04g0354 559 MobiDBLite consensus disorder prediction 487 513 - -
Lele04g0354 559 Gene3D - 116 221 IPR015300 -
Lele04g0354 559 SUPERFAMILY DNA-binding pseudobarrel domain 108 226 IPR015300 -
Lele04g0354 559 FunFam Auxin response factor 117 221 - -
Lele04g0354 559 CDD B3_DNA 118 219 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0354 Lele-ChrLele04 2095295 2098424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0354 18 557 B3 DNA Binding Superfamily AT1G77850 47.740 7.67e-170 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele04g0354 B3 7.3e-23 CL0405