Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0347 ATGCATCACCTACCTCTTTTTTTAGGTCTTAGAAAGCAAGCTCAGGGCATGGACCACAAGAAGATCCCAAGAAAACCGAAGCTCGAGCGCCGTAATGCCGCTAAATACTTTGAGTACGATGCTGTGTCATCTTCATCGTCGCTGGACGACTCCTCTGGTTCTCTATATACTCGATCAATGGAGTTTTATGACCGAACCAGCTTCCGAATCGAGGGTGTTGAGGGCGAGTTTGATCTTATATGCAGGAGTTTGGGGCTATCCGGACCAGAAGACTTCGCAATCCCGGCGGCGGCGTGGGAGGCTGTGAAGATTAGGTCGTCCTCGGATATTCTTCCAAGGTTGAAGTTGAAAGATTTGGAAAGTCGGGAGAAGGAGGAGCCGAAAGATAAAGGGGTTAATCAATTAGTGCGTGAATCAGGTGACAAATGTGAAGAAAGGATTACGATTAGAGATGTAAATGAATCAGCTAAGGATGAACCTGCTGAGACAAGTGGGGGCGGAGGTATCAAGGGTCTCCGTCCGCCGATGATTAGGCCACCACCAGGGATGAGGCTTCCAGTTATTGATAACATGTGTTCTACCTGGGATATTCTGAGAGATTTTGCTCCTCAAGGTGAAGGACAGTCATTGGAAAAGTACGAGGAGCCGAACTTTTCTGATGATGACCAAGAACGACGGAGAGAAACCGAGAGAGCAGAAGCGCAGAAACAAGAAGAAGCAGGAGTACGTGAGGCGGATGGGTTTACACCGAAGTTAGAAGAGGATAATGCATCAAGGCTTGCGGATGTTGTTGCTGAGTTTTCGGGATCGTGTTCACTTACTACGTCAAACGAAGATGATACTTCTAGCTCCTCCACGGGTCCAAGGTCTACCAATGTATCTCCTAATGTAAGATTTAGACGAATTATTGCGAACTGGCAAAAGGGCGAGCTTTTGGGACGTGGTTCGTTTGGGTCAGTCTACGAAGGAATTTCTGGAGATGGATTCTTTTTTGCTGTGAAAGAAGTCTCACTGCTCGATCAAGGGAGTCAGGGACGGCAGAGTGTCTATCAACTGGAGCAGGAGATTGCTCTTTTGAGTCAGTTTGAACATGAGAACATTGTTCAATACTATGGCACAGAAATGGATGAATCGAAGCTGTACATCTTTCTTGAGCTTGTTACTAAAGGTTCCCTTGCAAGCCTCTACAGGAGGTACAACCTTCGAGACTCTCAAGTGTCTGCCTACACAAGGCAGATTCTGCATGGTTTGAAGTATCTTCATGATCAAAATGTGATTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAGTGGATCTGTCAAGCTAGCGGATTTTGGATTGGCAAAGGCAACCAAATTCAACGATGTTAAATCATGCAAGGGGACAGCATTTTGGATGGCGCCTGAGGTTGTAAAAGGTAAGAATCGAGGTTATGGGCTTCCAGCTGACTTATGGAGTCTTGGTTGCACTGTATTGGAGATGTTAACCGGCCAAATTCCATACTCTCATCTGGAGGGGTTGCAAGCATTGTATAGAATTGGAAAAGGTGAGCGCCCGCCTGTTCCTGATTCTCTTTCAAAAGATGCAAGGGATTTTATACTGCAGTGTCTTCAAGTCAATCCAGACGAGCGTCCCACTGCTACTAAGCTGTTAAACCATCCATTTGTCCAAAGGCCACTATCCATTTCGTCTGGCTCTGGCTCTGCATCTCCTTATATTCCTGGCAGAAGGAATTAA 1746 0.4599 MHHLPLFLGLRKQAQGMDHKKIPRKPKLERRNAAKYFEYDAVSSSSSLDDSSGSLYTRSMEFYDRTSFRIEGVEGEFDLICRSLGLSGPEDFAIPAAAWEAVKIRSSSDILPRLKLKDLESREKEEPKDKGVNQLVRESGDKCEERITIRDVNESAKDEPAETSGGGGIKGLRPPMIRPPPGMRLPVIDNMCSTWDILRDFAPQGEGQSLEKYEEPNFSDDDQERRRETERAEAQKQEEAGVREADGFTPKLEEDNASRLADVVAEFSGSCSLTTSNEDDTSSSSTGPRSTNVSPNVRFRRIIANWQKGELLGRGSFGSVYEGISGDGFFFAVKEVSLLDQGSQGRQSVYQLEQEIALLSQFEHENIVQYYGTEMDESKLYIFLELVTKGSLASLYRRYNLRDSQVSAYTRQILHGLKYLHDQNVIHRDIKCANILVDASGSVKLADFGLAKATKFNDVKSCKGTAFWMAPEVVKGKNRGYGLPADLWSLGCTVLEMLTGQIPYSHLEGLQALYRIGKGERPPVPDSLSKDARDFILQCLQVNPDERPTATKLLNHPFVQRPLSISSGSGSASPYIPGRRN 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0347 581 Pfam Protein kinase domain 307 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0347 581 MobiDBLite consensus disorder prediction 205 250 - -
Lele04g0347 581 SUPERFAMILY Protein kinase-like (PK-like) 280 563 IPR011009 -
Lele04g0347 581 MobiDBLite consensus disorder prediction 213 250 - -
Lele04g0347 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Lele04g0347 581 FunFam Mitogen-activated protein kinase 1, putative, expressed 304 572 - -
Lele04g0347 581 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Lele04g0347 581 Gene3D Transferase(Phosphotransferase) domain 1 304 571 - -
Lele04g0347 581 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 77 576 - -
Lele04g0347 581 MobiDBLite consensus disorder prediction 271 293 - -
Lele04g0347 581 ProSiteProfiles Protein kinase domain profile. 306 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0347 581 MobiDBLite consensus disorder prediction 146 176 - -
Lele04g0347 581 SMART serkin_6 306 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0347 Lele-ChrLele04 2041742 2047635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0347 15 563 MAP Kinase Kinase Kinase AT4G08500 50.166 7.36e-170 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele04g0347 Pkinase 3.4e-69 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0347 04 2041742 2047635 Lele04g0347 04 2041742 2047635 ECH
Lele01g0343 01 1995217 2001278 Lele04g0347 04 2041742 2047635 hybridization
Lele02g0338 02 1930713 1936536 Lele04g0347 04 2041742 2047635 hybridization