Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0317 ATGGAGCTTAGTCCAAACAATCTGGGCACATGTAAGCGCCGGAATGCTCGCCGGAAGATGGTTCAGTCGACCTTGTTCCCTCAGAAAACTCAAGAGTCCGATGACACAGCTGATGATCAACAAGAGGAAGAAGACCCACACTGTTGTGCGAATGAGAACAGGAAGGGAAAGTCCAAACTTAAAGTTACTCCTCGAACCAAGAATTCCAAGCAAAAGGAGAGGCAGCTGCAGAATACTACGCCAGAGAATATGGGTACACCCAAGCGCCGGAATGTTTGCCGGAAGTTGATTCAGTCGACGTTGTCCCCACAGAAAAACCAAGAGCCCGATGGCAGAGCTGATGAAAAGGAGGAGAACAGTCTCTTTGATGGTCAACAAGAGAAAGAAGAGGCACACTGTTGCGTGAATGAGAATAAGAAGGGAAACTCCAATCGAAAAGTTACTCCCCGATCGAAGATTTCCAAGCAAAAGGAGAGGCATCTGCAGAATGCCACGCCAAAGAAACGGTCACCCAAAGGGACTAAGGGGGCAAGTTCACGGCAAATGTTGACCAATGTGGCACAGATTAATATGACGGTCCCTGATTTGCGTTTGGAGGCAAAACTGTCAGCTGAGGAAAATTCAAGGATTTTTGCGGGACGGCAAATACATCCCTTTTTTTCTTCACGGAAGGTTGGGAAGAAACCTCAGGAGGCAGCTGAATCTAACCGCAGTTTATATGCAGCAAGGAGGAAGTATGAGGAAGTACTTGCCTGTGCTGCTATTCATGTATTTGAAAATAATCAGGATGTTGATGATACATCATTGCCCGACTGGAAAAACTGGACGTTTTTGGGGCAGACTGCCAAAGCAAATTGTGGTCCAGAAAGTTCATTTTCCTCCGTTTTTGAGGGTTCTAGTGAACCCTTGAATATTGATAAGCTTCACGGTACTTTTTATCCCTCTGGTGTTACATTTTCTCAAAATGCTCTATCTTGTTCAGATCAACATTCAATAGAATCTGCACAGCCTCTACTAGAAAACTCAGCTGCACTGGCTGGCAGGCAAACAAGTCTTCAATCACCAAAAGCCAAACTGGAAATGAAAAATGATACTGAGCAAGCTGGCATTTTCAGAAAGTCAGATCCGGAACCACCGAATAGATTTCTTCAAGAAAGCATGAGGTCGTATTACCATAGTGGTGGAGATAAGGCTGAGGGAACCTTATGGACATACAAGTACAAGCCAACAAAGGCCTTTGAGGTATGTGGTAATGGCGAGTCTGTGAACTTTTTGCGTGACTGGTTACAACTCTGGCATGGAAGACGTTATCAAAGCAGGAAGGATGCCTTGTATAGGGATAAAGGTGATATGCAAGCTGATGACGATGATGAAGATTATGACTGTTCTCATTGTGACTATGATTCAGACAACATGACCGAGGAGGACTCCCTGGAGAATGTTCTCTTAATTACTGGACCAATTGGGAGTGGCAAGTCTGCAGCTGTATATGCTTGTGCACAAGAGGAAGGGTTTGAGGTTCTAGAGCTCAATGCATCAGACTGTCGAAATGGGACTACTGTCAAGCAGCACTTTGGAGATGCTCTTGGATCACTTGGGTTCAGAAGGTTATTGGAACACACCAATAGTTCACCAATGAAGAAAAAGAGGAAGTTATCCTCAGGCCTGGCTTTGCCTAGGAACAAAGCTTCTGATGAGTTAAACGTAGAGATAATTGGACCAATAGCCATATCTGATGATGAAGCTGTCTGCCCTGATGCAAGATCTCGGATGTTACCTGTCCAGAGAAACTTAATTGGATATGATGAAGTCCAAAAATTAATTCTAGTTGAGGATGTGGACATCCTTTTTCCTGAAGATCGCGGATGTATTGCTGCCATACGACAAATTGCTGAGACAGCCAAGGGGCCAATCGTATTAACCTGCAATAGCAATAATCCTGCTCTTCCAGATAAATTTAAAAGATTACATGTTTCTTTCTCATTGCCATCCACAAAGGAGTTACTGTCCCACTTGTACATGGTTTGTGTCACAGAAGGAGTCAACATTCATCCTCTTATACTGGAGAAATTTATACAATCTTGTGATGGTGATATCCGGAAAACCATGATGCATCTTCAGTTCTGGTTGCAGGGTAAAATAACATTAAGAAAAGACAGAAAAGCACAGCAATTGTATGGCTCTCTTCCATTTGACCTTGAGGTTGGCCATCAGATACTGCCCAAGATGATGCCCTGGGATTTTCCCTCTCACTTATCTGAACTAATTGAGAACGAAGTTACCAAGGTAATAACCACAATGGAAGAAAACTCTAGTCTGCAGGGGTTAGTTGAAGAACAGCTTGACATAAATGAAAAGCAAAGCGATTCACATTTGCAGCAGATGGGAACTGATTATATAGAGGCGAAGAAAGTAGAAATGCTTGAGAGGAATGGATCTGTTACTGACTACAGCGAATTGGAGGCTCAGTTTCATGATCTTTCGGAGATTTCAAATTCTACTTGCACCCCAGTTGCACCTTCTAATCGAAAGATTCAAAGGAAACTTGTAGTGATGTCCTCTGACTCTGAGGATGAGGATTTAAATAATGGGCATCCTCTAGACATGTGTGATGATGCTAACAGTGGACCATCTCTTGAGGACGACAGTGATTCTCCATCTAAATTTCCAATGGGTAATAAATACACTAGCACATCATTTCTTAAGCTGGGTACCGGATTGGAGGAGTCTGAGGTGGACCTGAGTAAACATTTAGTAACAGCTGATGGTATGTGTTTAAATGAAACATCCAAGTCATTTGATGTATCCTGTGTTCCAGAATCAACTTTTGTTCCTGAGACTGTTAATGAAGTAGAGACTATCTCTGAAGCAGTGTCTTGTGGCAATCTTGCTGGTCCTGTGGAAGTCTCGGTGAATAATGAGTCACTACCGTTCTCTTTCAGTGTTTGTAAGCGCTTAGCCAAGCGAGCACTAGATGATGATTTGTTGGGAAGTGCCAAAATACCAGAATCTTCTCAAAAAGAGATTGTGCAAGATTTAATTGATGAAAATGTGGAAACTATACCCGTGTATAATGTGATGGACGAATGCAGTCGAGTGGATTTCAAAATGAAGTCCAATTTTGTTGAACCCTTTCCATCAATGAGGACTGATGTTATACATAAGCTGTGGAGAGAACTTCGTGAATGTCAAACAGATTTAAGACAGCATGCCGCCCCTGAACAATCAGGTGCTTTTCAAGTTGTTAAACTAGCTTGCGATATGAGCAATCTAATATCAGAGGCTGACTTGCTGTTTGGTAACTACCAACAAAAAGATTGTGATATTTTGGAAGCTCCAACTTCACTTTTTAATGAACGCACCTTTAATTGGTATCATGAGCAGATGATGGCGTCCACTTTTGCTGAACACGGGTTTTGTTTTTACGCTAAGCACTTGTCAGATATGGGATTGAAGTCAGGCTGCGAGAACTGTGTAGATTTAACTTCGGAGATGTTGGCTTCCACTACTAACAAAATGGCCCTTGGCTATTTATCTGGACAGGGCCTCACAAACCGTACTAACCCCTCTACTGGAAAGGACTTAGAGAACAGGTCAATAAATGATTTGCCAGACAGCCAAATGCAGACACCACTGTTCAATGTAGTCCGGTCCATTGGACCTGCAAGATTATCCATAGCACTGAGAGGCGTTGTATTCAATGAATATCTATCTTCATTGCGCCTTATTGCCGGGTCAGAAGATTTCCGCGTATCACAGGGTGCTGAAAAGACTAGAAGGCGAAGGGTGCGGGGGGCTCAACATTACTGGAGTGAGGGTACTATGTCGTTGTCGCGTGAAGATATAACCTTGTTGTGTGAAGGAGATCTGTACAGAAAGATTTTTGCCAAGCATATAGGTGCCAGCAACAAGGTGGATAGCAACTTTACATAA 3933 0.43 MELSPNNLGTCKRRNARRKMVQSTLFPQKTQESDDTADDQQEEEDPHCCANENRKGKSKLKVTPRTKNSKQKERQLQNTTPENMGTPKRRNVCRKLIQSTLSPQKNQEPDGRADEKEENSLFDGQQEKEEAHCCVNENKKGNSNRKVTPRSKISKQKERHLQNATPKKRSPKGTKGASSRQMLTNVAQINMTVPDLRLEAKLSAEENSRIFAGRQIHPFFSSRKVGKKPQEAAESNRSLYAARRKYEEVLACAAIHVFENNQDVDDTSLPDWKNWTFLGQTAKANCGPESSFSSVFEGSSEPLNIDKLHGTFYPSGVTFSQNALSCSDQHSIESAQPLLENSAALAGRQTSLQSPKAKLEMKNDTEQAGIFRKSDPEPPNRFLQESMRSYYHSGGDKAEGTLWTYKYKPTKAFEVCGNGESVNFLRDWLQLWHGRRYQSRKDALYRDKGDMQADDDDEDYDCSHCDYDSDNMTEEDSLENVLLITGPIGSGKSAAVYACAQEEGFEVLELNASDCRNGTTVKQHFGDALGSLGFRRLLEHTNSSPMKKKRKLSSGLALPRNKASDELNVEIIGPIAISDDEAVCPDARSRMLPVQRNLIGYDEVQKLILVEDVDILFPEDRGCIAAIRQIAETAKGPIVLTCNSNNPALPDKFKRLHVSFSLPSTKELLSHLYMVCVTEGVNIHPLILEKFIQSCDGDIRKTMMHLQFWLQGKITLRKDRKAQQLYGSLPFDLEVGHQILPKMMPWDFPSHLSELIENEVTKVITTMEENSSLQGLVEEQLDINEKQSDSHLQQMGTDYIEAKKVEMLERNGSVTDYSELEAQFHDLSEISNSTCTPVAPSNRKIQRKLVVMSSDSEDEDLNNGHPLDMCDDANSGPSLEDDSDSPSKFPMGNKYTSTSFLKLGTGLEESEVDLSKHLVTADGMCLNETSKSFDVSCVPESTFVPETVNEVETISEAVSCGNLAGPVEVSVNNESLPFSFSVCKRLAKRALDDDLLGSAKIPESSQKEIVQDLIDENVETIPVYNVMDECSRVDFKMKSNFVEPFPSMRTDVIHKLWRELRECQTDLRQHAAPEQSGAFQVVKLACDMSNLISEADLLFGNYQQKDCDILEAPTSLFNERTFNWYHEQMMASTFAEHGFCFYAKHLSDMGLKSGCENCVDLTSEMLASTTNKMALGYLSGQGLTNRTNPSTGKDLENRSINDLPDSQMQTPLFNVVRSIGPARLSIALRGVVFNEYLSSLRLIAGSEDFRVSQGAEKTRRRRVRGAQHYWSEGTMSLSREDITLLCEGDLYRKIFAKHIGASNKVDSNFT 1310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0317 1310 MobiDBLite consensus disorder prediction 93 107 - -
Lele04g0317 1310 MobiDBLite consensus disorder prediction 852 891 - -
Lele04g0317 1310 MobiDBLite consensus disorder prediction 108 136 - -
Lele04g0317 1310 Gene3D - 401 661 IPR027417 -
Lele04g0317 1310 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 80 1294 IPR004582 GO:0006281
Lele04g0317 1310 MobiDBLite consensus disorder prediction 43 59 - -
Lele04g0317 1310 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 665 727 - -
Lele04g0317 1310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 402 716 IPR027417 -
Lele04g0317 1310 CDD AAA 482 543 - -
Lele04g0317 1310 MobiDBLite consensus disorder prediction 852 866 - -
Lele04g0317 1310 MobiDBLite consensus disorder prediction 1 180 - -
Lele04g0317 1310 Gene3D - 663 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0317 Lele-ChrLele04 1846977 1856095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0317 403 728 Core DNA Replication Machinery Family AT5G22010 20.846 1.86e-08 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0317 04 1846977 1856095 Lele04g0317 04 1846977 1856095 ECH
Lele01g0314 01 1794475 1803740 Lele04g0317 04 1846977 1856095 hybridization
Lele02g0306 02 1723664 1733269 Lele04g0317 04 1846977 1856095 hybridization