Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0303 ATGGCGGTTGAATCGGAGGTGGTGGTGGTGGGCCGGCGAGAGGAAGCCCATTTTCACGTGCTGGCGGTGGATGACAGTGTCATCGACAGGAAGCTTTTAGAGAGGCTCCTCACAGTTTCTTCATGCAAAGTGACCTGCGTGGACTCTGGGGATCAAGCTTTGAAGTACCTGGGTCTGCTTGATATTAAACCTTCCTCCTCTCCCCATTCGCCTTCCTCATCTTCTCCTCACCAATCGCCCCACCATGAGGGCACAAAAGTGAATATGATCATGACCGATTACTGCATGCCTGGGATGAGTGGTTATGATTTGCTGAAACGCCTCAAGGGATCTCCTTGGAAAGATATACCCGTCGTCATTATGTCATCAGAAAATGTGCCTTCCAGAATCAGCATGTGCCTGGAAGGAGGGGCGGAGGAGTTTCTATTGAAGCCGCTCCAGTTATCAGATTTGAAGAAGCTTCAGCCCTACTTCCAGAAATTCCCCGACAATTCATGCGAAGGAGAATCCATATCTACCGACAAGGATAACAATCGGGACGATAACGCTGGTAATAACTGTAACAATATTAGCAAACGGAAGGCCACGTCACCCGAACCTAGGGAGAGATCAAGATCCAAAATGAAGGAATTAGAGGTTGTGTGA 645 0.4884 MAVESEVVVVGRREEAHFHVLAVDDSVIDRKLLERLLTVSSCKVTCVDSGDQALKYLGLLDIKPSSSPHSPSSSSPHQSPHHEGTKVNMIMTDYCMPGMSGYDLLKRLKGSPWKDIPVVIMSSENVPSRISMCLEGGAEEFLLKPLQLSDLKKLQPYFQKFPDNSCEGESISTDKDNNRDDNAGNNCNNISKRKATSPEPRERSRSKMKELEVV 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0303 214 SMART REC_2 18 155 IPR001789 GO:0000160
Lele04g0303 214 ProSiteProfiles Response regulatory domain profile. 19 159 IPR001789 GO:0000160
Lele04g0303 214 MobiDBLite consensus disorder prediction 65 82 - -
Lele04g0303 214 SUPERFAMILY CheY-like 18 153 IPR011006 -
Lele04g0303 214 MobiDBLite consensus disorder prediction 165 214 - -
Lele04g0303 214 MobiDBLite consensus disorder prediction 65 84 - -
Lele04g0303 214 Pfam Response regulator receiver domain 84 153 IPR001789 GO:0000160
Lele04g0303 214 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 191 IPR045279 GO:0009736
Lele04g0303 214 Gene3D - 19 161 - -
Lele04g0303 214 MobiDBLite consensus disorder prediction 195 214 - -
Lele04g0303 214 CDD REC_typeA_ARR 20 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0303 Lele-ChrLele04 1782969 1784792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0303 10 173 Response Regulator Gene Family AT3G57040 56.627 1.96e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele04g0303 Response_reg 2.3e-14 CL0304