Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0301 ATGTCGTCTGCGAAGTCAAAGAAAGTGTTCGATGCTGAAGCAGCGGTTTTGCTCGTGGACGAGCTTAGGGGCACCTTCGCTTCTGGCAGGACGCGAAGTTACGAGTGGAGAGTTTCGCAGTTGAAGGCCCTTTCTAAGTTGGTCGATGATCGTGAGCAACAGATTATTGAAGCTCTCCGCTCCGATCTCTCCAAGCCCCCACTTGAAACCGTCGCCTACGAGATTGCTATGCTGAAAAATTCATGCAGAGTTGCACTGAAAGAACTGAAACATTGGATGAAGCCGGAGAAGGTCAAAACTTCAATCGCTACTTTTCCTTCTTCAGCAGAAATAGTGTCTGAACCTCTTGGGGTTGTGTTAATCATCTCGGCATGGAATTATCCATTTTTGTTATCACTTGATCCAGTCATTGGAGCTATTGCAGCTGGTAATGCGGTGGTGCTTAAACCATCAGAAATTGCTCCGGCCACATCATCACTGCTGGCAAAATTGTTAGAGGAGTACATGGATAATGCATCTATAAAGGTCGTTGAGGGGGCAGTTGATGAAACATCCGCTTTGCTGCAGCAGAAGTGGGACAAAATTTTCTATACAGGTAATGGAAGGGTGGGGCGCATAGTGATGGCTGCTGCTGCAAAACACCTTACGCCAGTTGTTCTGGAGCTTGGAGGGAAATCTCCAGCAGTTGTTGATTCAGATATCAATTTACGAGTAGCAGCTAGACGGTTAATTGCAGGCAAATGGGCTGGCAACAATGGACAAGCCTGCATTTCTCCAGATTACATTCTAACAACAAATGACTTTGCCCCTAAGTTGATTGATGCCCTAAAGACTGAATTGGAGAAATTTTATGGAGAAAACCCATTAGAATCAAAGGATTTGTCCCGCATTGTGAATTCGAATCACTTTGGTCGCTTGACAAAGCTCTTGGAAGATGATAAGGTCGCTGGTAAGATTGTCTATGGAGGAGAAAAGGATGAAAGCAAATTGATGATTGCTCCCACTATTTTACTGGATGTTCCTCAAAATTCTCTGATAATGAGGGAGGAGATATTTGGTCCTTTACTTCCCATTATCACGGTCAATAAATTGGAAGAAAGTTTCGATGTGATTAACTCAGGAACAAAACCCCTCGCTGCATATTTATTTACCAACAACAAGAAGCTCAGGGAGCAGTTTGTGATGACCGTATCTGCAGGGGGTTTGGTTGTCAATGACACTACCTTACATCTCGCCATCCATACTTTGCCTTTTGGAGGAGTTGGGGGGAGTGGAATGGGTTCATACCATGGGAAATTCTCGTTTGAAGCCTTCAGCCACAAAAAAGCAGTTTTGTATCGCGGCTTCATGGGAGATGCATCAGTGAGGTACCCTCCGTACACAAATACCAAGCTCAGACTGCTCAAGGCTTTGATTGGCGGCAGTATACTCGGCATAATCCGTGCCATTTTTGGATGGTCTTAG 1464 0.4495 MSSAKSKKVFDAEAAVLLVDELRGTFASGRTRSYEWRVSQLKALSKLVDDREQQIIEALRSDLSKPPLETVAYEIAMLKNSCRVALKELKHWMKPEKVKTSIATFPSSAEIVSEPLGVVLIISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEEYMDNASIKVVEGAVDETSALLQQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPAVVDSDINLRVAARRLIAGKWAGNNGQACISPDYILTTNDFAPKLIDALKTELEKFYGENPLESKDLSRIVNSNHFGRLTKLLEDDKVAGKIVYGGEKDESKLMIAPTILLDVPQNSLIMREEIFGPLLPIITVNKLEESFDVINSGTKPLAAYLFTNNKKLREQFVMTVSAGGLVVNDTTLHLAIHTLPFGGVGGSGMGSYHGKFSFEAFSHKKAVLYRGFMGDASVRYPPYTNTKLRLLKALIGGSILGIIRAIFGWS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0301 487 PIRSF ALDH 3 481 IPR012394 GO:0006081
Lele04g0301 487 FunFam Aldehyde dehydrogenase 23 227 - -
Lele04g0301 487 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 220 227 IPR029510 GO:0016491
Lele04g0301 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 224 424 IPR016163 GO:0016620
Lele04g0301 487 PANTHER ALDEHYDE DEHYDROGENASE 18 477 IPR012394 GO:0006081
Lele04g0301 487 FunFam Aldehyde dehydrogenase 224 424 - -
Lele04g0301 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 442 IPR016162 GO:0016491
Lele04g0301 487 SUPERFAMILY ALDH-like 19 460 IPR016161 GO:0016491
Lele04g0301 487 Pfam Aldehyde dehydrogenase family 25 444 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0301 Lele-ChrLele04 1767633 1772092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0301 10 487 Aldehyde Dehydrogenase Gene Family AT4G34240 68.410 0.0 669