LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele04g0291	ATGGCAGCATGGGGAAGGGACCAATCACATAGAAGCCTTGAAGCTGCTGTGGGTGATTTTTATCGGGCTCATCTTCGCTCTCGTTATTCAGTCCTTGGCCGCAAATCTCGGCGCAAACACCTTTCGGAATTATGTAAAGCGGAGTACCCCTTGTTTGTCAAGTATTGCTTATGGTTCTTAGCGGAGGCTGCCGTCATAGCCGCCGACGTCCCCGAAGTAATTGGCACCGCCTCTGCCCTCAACATCCTCTTCCGTATCCCACTATGGGCCGGAGTCCTGTTCACTGGTTTCAGCACTCTCTTGCTTCTCAGTCTCCAGATATTTGGGGTGAGGAAGCTGGAAATGGTGATATCAATGCTTGTGTTTGTAATGGCGGCATGTTTCTGGGCAGAAATGAGCTTCGTAAAGCCACCAGCCTCTGAGGTAGTGAAAGGCATGTTTGTTCCCAAACTCAGTGGCCAATCAGCCACCGCCGACGCCATTGCCCTTCTCGGCGCTCTTGTCATGCCCCACAACATCTTCCTTCATTCTGCTCTTGTGCTCTCTAGACAAGTTCCCTCTACTGTGCGTGCCGTTAATATACTTCCTGATAGAGAGTGGAATCGCACTCCTTATAGCCTTTCTGATCAATCTCAACCATTTACGCCGTCGCGCTACTCGCCTCTGGCCAAAGCTCTACTATCACTGGCACATATGCAGGGCAATACATTATGCAGGTCAATCCACCATCATCGTTATCATTATTTTTGTGGGACACTATTGTTTCCTGAAATTAACCAGATTATACTTTCGTTTGAGCTTCCGTTCGCTTTGATCCCACTTCTCAAGTTTAGCAGCAGCAGCACCAAGATGGGTCCTCACAGGAATTCCATCATCATTATAGTCATATCATGGATTCTCGGGATAGGGATAATTGCAATCAATATGTATTACCTCAGTACAGGGTTCGTGGGATGGCTAATTCATAGCACTCTACCTAAGGTGGCAAATGTGATCATTGGGACCATAGTGTTTCCTTTAATGGCAACGTACATCATAGCGGTAATTTACCTAACCGTTAGAAAAGACACTGTAAAGACATATATTGAGACCAAGAACGACCCAATAGTACAAACCCGCATGGAAAAGGAATAG	1134	0.4691	MAAWGRDQSHRSLEAAVGDFYRAHLRSRYSVLGRKSRRKHLSELCKAEYPLFVKYCLWFLAEAAVIAADVPEVIGTASALNILFRIPLWAGVLFTGFSTLLLLSLQIFGVRKLEMVISMLVFVMAACFWAEMSFVKPPASEVVKGMFVPKLSGQSATADAIALLGALVMPHNIFLHSALVLSRQVPSTVRAVNILPDREWNRTPYSLSDQSQPFTPSRYSPLAKALLSLAHMQGNTLCRSIHHHRYHYFCGTLLFPEINQIILSFELPFALIPLLKFSSSSTKMGPHRNSIIIIVISWILGIGIIAINMYYLSTGFVGWLIHSTLPKVANVIIGTIVFPLMATYIIAVIYLTVRKDTVKTYIETKNDPIVQTRMEKE	377

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele04g0291	377	PANTHER	SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER	258	357	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lele04g0291	377	Pfam	Natural resistance-associated macrophage protein	38	185	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lele04g0291	377	PRINTS	Natural resistance-associated macrophage protein signature	160	183	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lele04g0291	377	PRINTS	Natural resistance-associated macrophage protein signature	85	104	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lele04g0291	377	PRINTS	Natural resistance-associated macrophage protein signature	57	83	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lele04g0291	377	PRINTS	Natural resistance-associated macrophage protein signature	110	131	IPR001046	GO:0016020\|GO:0030001\|GO:0046873

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele04g0291	Lele-ChrLele04	1720348	1723120	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele04g0291	258	356	Inorganic Solute Cotransporters	AT1G15960	52.525	3.98e-25	104

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele04g0291	04	1720348	1723120	Lele04g0291	04	1720348	1723120	ECH
	Lele01g0295	01	1687024	1691792	Lele04g0291	04	1720348	1723120	hybridization
	Lele02g0282	02	1615760	1618549	Lele04g0291	04	1720348	1723120	hybridization