Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele04g0287 | ATGTCTACCCAGAATAGGCGTCCATCGTTTTCCTCCTCGACGACGTCGTCTTTGGCAAAGCGGCATGCATCGTCGTCGGAGAATGTGGGGAAGGCTGTGGCAGCCCCTTCACACTTGGCCAAGAAGCGAGCGCCTCTCAGTAACCTGACCAATCAAAAGAATGCTTCCTATAGTGCTTTGCGAAAGTCACTGCCATCATCTACTTTGGTAACCTGCACAACTAAAATTACTCAGACAGAGAAGAAATTCCCTGCTTGCACCACAAGCTCAGCCATTTCAGGGAATAAAATGCCTACTTCGTCAAATGCTAAATCGACTGCAGTTGTTTTCCCCAAGGCCACTTCTTGCCCACAAAGGGATGAAAGTGCTTCTGCTACTGTTGCTCTTCCTTGCAGCATTGATACTTCTATCAAATCAGATAGGATGTCAGTTTCTTTGGACGAGACGATGTCTACCTGCGACTCTTTCAAGAGTCACGAAATTGAATATATTGACAACAGCGATGTTTCAGCTCTTGATTCTATTGACAGAAAGACATTCAGCAATCTGAACATCTCAGATAATACGGAGGCACCAGTTAATGCTTGTAGTAGAGGCATACTTGTTGACTTGGAAAGAGATGGCAAATTTGTCAATATCGATGACAACTGCTTGGATCCCCAGCTTTGTGCACCCTATGCATGTGATATCTACAAGCATTTGCGTGCATCTGAGGCAAAGAAAAGGCCTTCCACAGATTTCATGGAGCGAATTCAGAAGGACATAAATTCCAACATGCGTGCTATATTAGTTGACTGGCTTGTGGAGGTGGCTGAAGAGTATAGTCTAGGGCCTGTTACATTGTATTTGACAGTCAACTACTTAGATCGGTATCTTTCAGGGAATGTAATGAGTAGGCAAAAGTTACAATTACTTGGTGTTGCCTGCATGATGATTGCCGCTAAATATGAGGAGATTTGCGCGCCTCAGGTGGAGGAATATTGTTATATAACTGATAACACATACTTCAAAGAAGAGGTTTTGCAAATGGAATCTGCTGTCTTAAATTATCTGAAGTTTGAAATGACAGCTCCGACAATAAAATGTTTCTTAAGACGATTTGTTCGTGCAGCTCAAGGAGCCAACGAGGTTGCATCATTACAATTAGAGTGCTTGACCAACTATATTGCTGAGTTGTCTTTACTGGAGTATACAATGCTCTGTTATGCCCCATCACTTATAGCTGCTTCTGCAATCTTCCTGGCGAAACTCATCCTTTTCCCTTCAAAAAAACCATGGAATTCCACATTGCAGCATTACACACTCTACAAGGCTTCTGATTTGCGTAACTGTGTGAAGGATCTCCATCGTCTATGTTATAACAGCCATAGTTCTGGCTTACCTGCAATTCCGGAGAAATACAGTCAACACAAGTACAAATATGTGGCAAAGAAGTCGTGTCCTCCGTCAATCCCTCGAGAACTTTTCCAAATTTACCTGATGAGTTTCCTGAGGCCCTCAGCATTGTACGCATTTCTTATTTCATGTCCTTCCTTCAGATGGATGCCCTGTCAGAGTTGGGGGTTTCTCCGATGGCCCGGTCTCGATGGCTTCTTGAGACTTTTGGTGATGTTCCTTCTCTGGTCTATGTTCTTGGAGCTTCGCTTCATACCTTCATCTTCTATGCACCCCACTCTTACAGTTGGTGATCGAATTATTGTCGAGAAGGCTTCGTATTACATCAAGAGTCCTGCCGCACAGGATATTGTATTATTCCAAGATCCGACACAGCTCTCTGAAGACAAAGCAGCCGATATATTTATCAAGAGAGTTGTTGCAAAAGCAGGAGATTTTGTTCAGGTTCGTGGTGGGTCTCTCTACCTCAACGGTGTTGCTCAGAAGGAAGATTATGTAGAAGCACAACCAACATACACGACGAACTTAACTTATGTACCAAACGGTCATGTTTATGTGTTGGGTGACAATCGAAACAAGAGCTATGATTCGCATGGGACCATTGCCTGTCAAAAACATAGTGGGAAGATATGTCATGTGTTGTCACAGACCCACAAACACCTGACAAATTATATTAACTTTGCTCGGTTAGCATATTCGTGTTTTGGCGTTTTCCTTGCCTTGTCGGATGGAGCAGGAGATACCGTAATGTGGCGTTTCCTTGCACGACTTGTCAACCAGAATTATGAGTGCAACTTGTTAGTGGGAAGTTTTCTTGTTCCAATAAGGAGACGGCCTGGGACAATAGGAATGCGCCAGCATGAATGGAGAAAAGAAAAGGACAAGAGTTTTGCTGGAATTCGGGCTCGTGAAGGGACTCCCAATCCCAAAAAGGGTGCTCCTTTAAAGAGACATTTCATTCTAACGTATTATTTTGTCCCTCTCTCTTCCTCTCTATATAACCCTCCCTCCTCTTACTCCACATACACCACACCTCTCTACTATATATATATATTCATTCGTTTCAAGATGGTTGAGAACGGCACCGCTCAGAACCGTCAGCCATTTCAAGTCTCCATTGCCGTGGCTCCACAAGGCGGCTCCAAGTGCTTCGACGACGATGGTCGCCTCAAGCGAACTGGGACTGTTTGGACCGCCAGCGCTCACATCATCACCGCTGTCATAGGCTCCGGTGTGCTGGCCCTCGCCTGGGCCATAGCTCAGCTCGGATGGATTGCGGGACCTGCCGTGATGATTCTCTTCTCTTTTGTCACTTACTACACCTCCACCCTCCTCTCTGCCTGCTATCGTTCCGGTGACTCTTATACCGGAAAGAGGAACTACACTTACATGGACGCCGTCCGATCAAACCTCGGCGGCTTTAAGGTCAAGATTTGTGGGCTGGTTCAGTATACGAACCTGTTCGGCGTCGCCATTGGATACACTATTGCAGCTTCCATAAGCATGATGGCAGTCCAAAAGTCAAACTGCATTCACAAGACCGGGAGCAAAGACGAGTGCAAAATGAATGGAGATATGTACATAATTGCATTTGGCATAGCGGAGATTGTCTTCTCTCAAATTCCAGACTTTGATCAGTTATGGTGGTTATCCATTGTAGCTGCCATCATGTCCTTCACCTACTCAATCATTGGGCTTGCCCTCGGTGTTGCTCAAACTGTAGAAAACAAGAAAATTGGAGGAAGCCTAACAGGGGTAAGCGTGGGTGCTGTGATAGACTCCCAAGTGGTGTCAGAGTCAAAGAAAATTTGGAGGAGCTTCCAAGCTCTGGGCGACATAGCCTTCGCCTACTCTTATTCAATGATCCTCATAGAAATCCAGGACACGCTGAAAGCTCCACCATCGGAAGCAAAAACAATGAAGAAGGCAACTTTTATCAGCGTAGTGGTGACCACATTTTTCTACATGCTATGTGGCTGCTTTGGCTACTCTGCATTCGGAGACCAAAGCCCAGGAAACCTACTCACCGGTTTCGGATTCTACAAACCTTATTGGCTCCTCGACATAGCAAATGTTGCCATTGTTGTCCACCTCGTCGGAGCTTACCAGGTTTATTGCCAACCCCTCTTCTCTTTCGTTGAGAAGGCAGCATCGGAAAAATTCCCAGAAAGTAATTTTGTCAACGAGCAAATTGAAATTCCAATCCCTGGTCTCCGATCGCCCTACCGACTCAACTTCTTCCGATTGGTGTGGAGGACCATTTTTGTGATCATAACCACCGTGATATCAATGCTTCTTCCATTCTTCGGCGGCGTTGTGGGTCTTCTCGGAGCCGTTGGGTTTTGGCCTCTCAGCGTGTATTTCCCGGTGGAGATGTACATAAACCAGAAGAGAGTACCAAGGTGGAGCACCAAATGGGTCTGCCTGCAAATGCTCAGTTTTGCTTGCCTCATCATTTCTTTGGCAGCCGCCGCCGGTTCTATTGCCGATATCATGGATCAACTTAAATCTTACAAGCCATTCGTGGTCACCTTATAA | 3933 | 0.4551 | MSTQNRRPSFSSSTTSSLAKRHASSSENVGKAVAAPSHLAKKRAPLSNLTNQKNASYSALRKSLPSSTLVTCTTKITQTEKKFPACTTSSAISGNKMPTSSNAKSTAVVFPKATSCPQRDESASATVALPCSIDTSIKSDRMSVSLDETMSTCDSFKSHEIEYIDNSDVSALDSIDRKTFSNLNISDNTEAPVNACSRGILVDLERDGKFVNIDDNCLDPQLCAPYACDIYKHLRASEAKKRPSTDFMERIQKDINSNMRAILVDWLVEVAEEYSLGPVTLYLTVNYLDRYLSGNVMSRQKLQLLGVACMMIAAKYEEICAPQVEEYCYITDNTYFKEEVLQMESAVLNYLKFEMTAPTIKCFLRRFVRAAQGANEVASLQLECLTNYIAELSLLEYTMLCYAPSLIAASAIFLAKLILFPSKKPWNSTLQHYTLYKASDLRNCVKDLHRLCYNSHSSGLPAIPEKYSQHKYKYVAKKSCPPSIPRELFQIYLMSFLRPSALYAFLISCPSFRWMPCQSWGFLRWPGLDGFLRLLVMFLLWSMFLELRFIPSSSMHPTLTVGDRIIVEKASYYIKSPAAQDIVLFQDPTQLSEDKAADIFIKRVVAKAGDFVQVRGGSLYLNGVAQKEDYVEAQPTYTTNLTYVPNGHVYVLGDNRNKSYDSHGTIACQKHSGKICHVLSQTHKHLTNYINFARLAYSCFGVFLALSDGAGDTVMWRFLARLVNQNYECNLLVGSFLVPIRRRPGTIGMRQHEWRKEKDKSFAGIRAREGTPNPKKGAPLKRHFILTYYFVPLSSSLYNPPSSYSTYTTPLYYIYIFIRFKMVENGTAQNRQPFQVSIAVAPQGGSKCFDDDGRLKRTGTVWTASAHIITAVIGSGVLALAWAIAQLGWIAGPAVMILFSFVTYYTSTLLSACYRSGDSYTGKRNYTYMDAVRSNLGGFKVKICGLVQYTNLFGVAIGYTIAASISMMAVQKSNCIHKTGSKDECKMNGDMYIIAFGIAEIVFSQIPDFDQLWWLSIVAAIMSFTYSIIGLALGVAQTVENKKIGGSLTGVSVGAVIDSQVVSESKKIWRSFQALGDIAFAYSYSMILIEIQDTLKAPPSEAKTMKKATFISVVVTTFFYMLCGCFGYSAFGDQSPGNLLTGFGFYKPYWLLDIANVAIVVHLVGAYQVYCQPLFSFVEKAASEKFPESNFVNEQIEIPIPGLRSPYRLNFFRLVWRTIFVIITTVISMLLPFFGGVVGLLGAVGFWPLSVYFPVEMYINQKRVPRWSTKWVCLQMLSFACLIISLAAAAGSIADIMDQLKSYKPFVVTL | 1310 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele04g0287 | 1310 | FunFam | Mitotic cyclin 6 | 243 | 343 | - | - | |
Lele04g0287 | 1310 | TIGRFAM | sigpep_I_bact: signal peptidase I | 533 | 676 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Lele04g0287 | 1310 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
Lele04g0287 | 1310 | Pfam | Signal peptidase, peptidase S26 | 531 | 675 | IPR019533 | GO:0004252|GO:0006465 | |
Lele04g0287 | 1310 | SMART | cyclin_7 | 265 | 349 | IPR013763 | - | |
Lele04g0287 | 1310 | SMART | cyclin_7 | 362 | 450 | IPR013763 | - | |
Lele04g0287 | 1310 | Gene3D | - | 229 | 477 | - | - | |
Lele04g0287 | 1310 | Pfam | Transmembrane amino acid transporter protein | 857 | 1295 | IPR013057 | - | |
Lele04g0287 | 1310 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 644 | 663 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Lele04g0287 | 1310 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 543 | 559 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Lele04g0287 | 1310 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 600 | 612 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Lele04g0287 | 1310 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Lele04g0287 | 1310 | PANTHER | OS05G0424000 PROTEIN-RELATED | 852 | 1294 | - | - | |
Lele04g0287 | 1310 | CDD | CYCLIN | 356 | 449 | IPR013763 | - | |
Lele04g0287 | 1310 | FunFam | Amino acid permease 6 | 854 | 1300 | - | - | |
Lele04g0287 | 1310 | FunFam | Cyclin A1 | 345 | 477 | - | - | |
Lele04g0287 | 1310 | ProSitePatterns | Signal peptidases I signature 3. | 649 | 662 | IPR019758 | GO:0004252|GO:0016020 | |
Lele04g0287 | 1310 | Gene3D | Umud Fragment, subunit A | 552 | 683 | - | - | |
Lele04g0287 | 1310 | SMART | Cyclin_C_2 | 358 | 481 | IPR004367 | - | |
Lele04g0287 | 1310 | SUPERFAMILY | Cyclin-like | 358 | 483 | IPR036915 | - | |
Lele04g0287 | 1310 | CDD | S26_SPase_I | 546 | 662 | IPR019533 | GO:0004252|GO:0006465 | |
Lele04g0287 | 1310 | Gene3D | - | 243 | 356 | - | - | |
Lele04g0287 | 1310 | CDD | CYCLIN | 259 | 348 | IPR013763 | - | |
Lele04g0287 | 1310 | Pfam | Cyclin, C-terminal domain | 358 | 479 | IPR004367 | - | |
Lele04g0287 | 1310 | Pfam | Cyclin, N-terminal domain | 229 | 355 | IPR006671 | - | |
Lele04g0287 | 1310 | SUPERFAMILY | Cyclin-like | 219 | 355 | IPR036915 | - | |
Lele04g0287 | 1310 | SUPERFAMILY | LexA/Signal peptidase | 543 | 663 | IPR036286 | - | |
Lele04g0287 | 1310 | ProSitePatterns | Cyclins signature. | 260 | 291 | IPR006671 | - | |
Lele04g0287 | 1310 | ProSitePatterns | Signal peptidases I serine active site. | 552 | 559 | IPR019756 | GO:0004252|GO:0016020 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele04g0287 | Lele-ChrLele04 | 1687862 | 1705313 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele04g0287 | 829 | 1306 | Organic Solute Cotransporters | AT1G77380 | 73.013 | 0.0 | 728 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele04g0287 | 04 | 1687862 | 1705313 | Lele25g0240 | 25 | 1435822 | 1438012 | CCT | |
Lele04g0287 | 04 | 1687862 | 1705313 | Lele26g0249 | 26 | 1483917 | 1489295 | CCT | |
Lele04g0287 | 04 | 1687862 | 1705313 | Lele27g1847 | 27 | 23290079 | 23295848 | CCT | |
Lele04g0287 | 04 | 1687862 | 1705313 | Lele28g0262 | 28 | 1546283 | 1551643 | CCT | |
Lele04g0287 | 04 | 1687862 | 1705313 | Lele04g0287 | 04 | 1687862 | 1705313 | ECH | |
Lele01g0292 | 01 | 1667583 | 1675444 | Lele04g0287 | 04 | 1687862 | 1705313 | hybridization | |
Lele02g0280 | 02 | 1599871 | 1607278 | Lele04g0287 | 04 | 1687862 | 1705313 | hybridization |