LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele04g0284	ATGGCGAAGCCATTCATCTTCCTTTGCCTCCTCATCTCCCTCGTCTTCACCGTCTCGCTTGCTGCTTCACCTCCCCCTCCTCCATGTCCGTTTGATCTTACCTACGTCCTAACTGTCCCCTGGGACACTTCAACTTGCCTTAAAGTTGACCCAAAAAATGGAACCCAACACTGTTGTCAAGCCCTTCTCAGCCTCTTCGGGGTCGGACTTGCTCAGCACCTCAAAGACACCTCCATCTTCGAACTTCCCGATGTTCAATCTTCCTCTTCTTGCCTCTCCGAATTCAGTACCAAGCTCGCAGCTTTATCAATCCCCGCCGATATGGTCTCCACTTGCTTCCAGAACTCTACTCAGTTCGTTGCCAATACCTCGAGCTGTGCAGGAATTAAAACCGCCCAAGATTTTAATTCGAAGGTTGGCATGATGACACCTTTAGATACATCTTGTAATGGTGACCTCATGGGGCTAACTCGATGTGGTATTTGCCTTGATGCTGGCTTCAAGGTCACTTCCCAATTGACTGCTCTGGATCCAAAAAACTCCAGTAAGTGTTTCTACTTCACAGTCTTATATGCTGCTGCTTTTTTTAACCAGTACGGTCCTAAAGATGCTAGAACAGCTAGTTGCATACTTGGCATGCCTCTGTCTACTGCTGGAACAAAAGGGTCGTCTAACAGAGACCGTACTCTGAAGTTGAGTTTTGGGTTATTGGGTGCGGTTGTCGGTATTCTTCTTGCCTTTCTTCTGATTGCTGTCTACAGGAAGTGGGATAGGAGAAGGAGGGAAAATATTCATCACAGAGCAGTTGTGAGCAGCGTGAGGGCCAATGTTTTGCCTTACACCGGGGCGAAATGGTTTCATTTGTCAGAGCTTGAAAAAGCCACTGATAAATTTTCCCAGAGGAATCTGATCGGTCAAGGATCTGATGGGATTGTGTACAAAGGAACTCTTCAGGATGGCGCTTTAGTTGCAGTGAAAGAGATTTTTGATCTGGAAACCAAAGGGGATGACGAGTTCTGCTATGAAGTGGAGATCATCAGCAAAATAAAGCACAGGAATCTTGTGGCTCTCCGAGGTTGTTGTGTTACAAGTGATAACACCAAAGGTAAAAGAAGATTTCTGGTTTATGATTACATGCCGAATGGCAGCCTCGGTTACCAATTATCTCTTTCTGGAGCTAACAGGCTAACATGGCCACGGAGAAAGAACATAATTCTCGACGTGGCTAAAGGGCTCGCTTATCTGCATTACGAAATCAAACCCCCAATTTATCACCGTGACATAAAGGCCACGAACATACTTCTAGACTCCACAATGAAAGCTAAAGTTGCAGATTTTGGATTAGCCAAGCAAGGAAACGAAGGCCAGTCTCATCTTACCACAAGGGTTGCTGGCACGTATGGTTATTTAGCACCAGAGTATGCTCTGTATGGGCAACTAACAGAGAAAAGTGATGTTTATAGCTTTGGGATTCTGATTCTTGAAATCATGAGCGGAAGAAAGGTGCTTGACACTTCAAATTCATCGATTCTCTTGATCACAGACTGGGCTTGGACGCATGCGAAATCAGGAAAGATAGAGGAAATATTGGAGGAGTCAATAAGAGAAGGAGGGCCGAAGAGGATAATGGAGAGGTTTGTTCTTGTTGGGATTCTCTGTGCCCATGTGATGGTGGCTCTGAGGCCCACTATTTCTGAAGCACTCAAGATGCTAGAAGGTGACATTGACATTCCCAATTTACCAGACAGACCAGTGCCCCTGGGTCACGAGTCCTTTCAATCTTCCCTTTTGTATGGCCTTCCAAGAAGTGGAATATCTACACCGTTCGGTTCATCTATTCAAGTGTGA	1848	0.4567	MAKPFIFLCLLISLVFTVSLAASPPPPPCPFDLTYVLTVPWDTSTCLKVDPKNGTQHCCQALLSLFGVGLAQHLKDTSIFELPDVQSSSSCLSEFSTKLAALSIPADMVSTCFQNSTQFVANTSSCAGIKTAQDFNSKVGMMTPLDTSCNGDLMGLTRCGICLDAGFKVTSQLTALDPKNSSKCFYFTVLYAAAFFNQYGPKDARTASCILGMPLSTAGTKGSSNRDRTLKLSFGLLGAVVGILLAFLLIAVYRKWDRRRRENIHHRAVVSSVRANVLPYTGAKWFHLSELEKATDKFSQRNLIGQGSDGIVYKGTLQDGALVAVKEIFDLETKGDDEFCYEVEIISKIKHRNLVALRGCCVTSDNTKGKRRFLVYDYMPNGSLGYQLSLSGANRLTWPRRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSTMKAKVADFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGILILEIMSGRKVLDTSNSSILLITDWAWTHAKSGKIEEILEESIREGGPKRIMERFVLVGILCAHVMVALRPTISEALKMLEGDIDIPNLPDRPVPLGHESFQSSLLYGLPRSGISTPFGSSIQV	615

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele04g0284	615	FunFam	probable LRR receptor-like serine/threonine-protein kinase RKF3	379	579	-	-
	Lele04g0284	615	ProSiteProfiles	Protein kinase domain profile.	298	558	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele04g0284	615	Pfam	Protein kinase domain	299	568	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele04g0284	615	PANTHER	OS01G0750732 PROTEIN	43	579	-	-
	Lele04g0284	615	CDD	STKc_IRAK	304	573	-	-
	Lele04g0284	615	Pfam	SPARK	26	185	IPR043891	-
	Lele04g0284	615	FunFam	Receptor-like serine/threonine-protein kinase At4g25390	263	378	-	-
	Lele04g0284	615	SMART	serkin_6	298	571	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele04g0284	615	Gene3D	Phosphorylase Kinase; domain 1	259	378	-	-
	Lele04g0284	615	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	423	435	IPR008271	GO:0004672\|GO:0006468
	Lele04g0284	615	SUPERFAMILY	Protein kinase-like (PK-like)	282	588	IPR011009	-
	Lele04g0284	615	Gene3D	Transferase(Phosphotransferase) domain 1	379	577	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele04g0284	Lele-ChrLele04	1672886	1674733	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele04g0284	22	593	Receptor kinase-like Gene Family	AT1G11050	53.322	0.0	590

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RKF3	Lele04g0284		Pkinase	1.8e-43	CL0016