Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0280 ATGGTAGCATGTCTCTGCACGTGTCACATGGCATTCTCAGTCGACATGAGCTCCTTCGCGGTGGCCGGCATGATCTCACCTTCACAACTTCGTTTCTTTAAGCTTCCTCAGTCCTTTGGCAATGGTGCTGTCTTCGGTTTCGAGTTTCAGAGGAAGGCAAGGCCAAGGAGACAACTCAAGTTCGTCATCAGTGCGGAGCTTTCCAACTCCTTCTCGTTAAATTTCGGATTGGATTCTCAGAATTTGAATTCCTTTCAATCCCATGATCCATCTCAGTTGCCTTGGATGGGACCAATGCCTGGCGATATTGCTGAAGTAGAGGCATACTGTAGGATCTTTAGAACCTCTGAAAGGCTTCATTCAGCATTAATGGATGCATTATGCAACCCGATGACTGGTGAATGTAGTGTCTCATATGAAGTTCCATCTGATGAGAAACCTCAACTGGAAGATAAATTAGTCTCTGTCCTTGGATGCATGATTTCACTTGTGAACAAAGCCAGGGAGGATGTTCTTTCTGGTAGATCCTCAAGTATGAATCCCTTTCGTGTTGCTGAAGTGAGCATAATGGAGGACGAGCTTCCCCCACTTGCCAGTTTTAGGAATGAGATGAAAAGGTGTTGTGAGAGCTTGCATGTAGCTCTTGAGAATTATTTAACACCTGGTGATAATCGAAGCTCGGATGTATGGAGGAAACTCCAGCGACTAAAGAATGTTTGCTATGATTCTGGTTTTCCTCGTGGGGACAATCATCCTTGCCACACACTTTTTGCGAATTGGAGTCCTATTTATTTATCCACTTCGAAAGAGGATACAAAATTTAACTCTGAGGCAGCTTTTTGGACGGGTGGTCAGGTGACAGAAGAAGGCCTGAAGTGGTTACTGGATCAAGGATATAAAACTATTATTGATCTGAGAGCGGAGACTGTCAATGATAACTTCTATCAAGCAGCCATTCATGATGCTATTGCATCTGGGAAAATTGAAGTGGTTAAAATTCCAGTAGAAATTAAGACTGCACCTACAATGGAACAGGTTGTTAGGTTTGCATCTTATGTTTCAGACCACAGCAAAAGGCCTATTTATCTTCACAGCAAGGAAGGAGTTTGGAGAACATCTGCCATGGTCTCCAGGTGGAGGCAGTACATGACTCGCTCTGCATCTCAGGCTGTTTCTAATCAAGCTGTAATTTCTGATGAGAAGTTATCGCATCATACGAATGAATATGGAAAACTGCAGGACTCTTTGATGGGTGCAGAGAGATCTTCTTTGTACAAGGATATTGATTCATTATCAGATAATTTGAGTGTAACATGTGATAGAAGTACCTTCACAAAGAATGATGACCAAGAAATGCAAAGTAATGGAACCCTTTGTCGATTCACTGATAACCACGGCATGTTGTCAGAAGCCACAATTGCAGCTAAAGGAGAGGAATCATTTTCAGGTTTCTCCAACAAAATTAATCCTTTCAAAGCTCAGATTCCTCCTTGTGATGTCTTTTCAAAAAAGGAGATGTCCAGCTTTTTGGGAAGTGGAAAGATATCCCCACAATTATTTTTTAATTATAAGATTAAAAGATTGGAAAGCTTGCCAGACTCAAGGAACATGTATATTGGCAGGTCACATGGGGGTGTGATCATCAGCAATGGTAATAATCATGTACCCAAAATTGCGGATCCAGGAAGTTCCGACGGGTCAGCTCTTGTGGACCATCTATCAGGAGAGCCCCAGATTAAAGTTGGTGGCAATTCTAAGTCAGTGAATGGAAGTACTTCTAATGATGTTAAGAGCACAATAAATGGATTTAGTGAAGGAAAAAAGTATTCCATGCCTACTTCCAGTGTCTCTACTGCTGTGAACAAATTCTCTGATGACATCACAAATAAATCTCCTAGGGTTGGAGATGGTAGGGGTGACTCAGGAACAGCCTTACGTAATGAAGACTCGGGACCCGTTGAAGGGGATATGTGTGCATCTTCGACAGGTGTTGTGAGGTTGCAGTCAAGAAAGAAAGCCGAGATGTTCTTAGTACGGACAGATGGATTTTCTTGTACCAGAGAAAAAGTGACCGAATCTTCTTTGGCTTTCACTCATCCAAGCACCCAGCAACAGATGCTTATGTGGAAATCTGTGCCAAAGACTGTATTACTGTTGAAAAAGATGGGGGAAGAACTGATGGAAGAAGCTAAACAGGTTGCTTCTTTTTTATATTACCAAGAGAAAATGAACGTTCTTGTGGAACCTGATGTGCATGATATATTTGCTAGGATTCCAGGGTTTGGATTTGTTCAGACCTTCTATAGTCATGATACCAGTGATCTGCACGAGGAAGTAGATTTTGTGGCATGCTTGGGTGGAGATGGTGTTATACTGCATGCTTCAAATATATTCAGGGACGCTGTTCCCCCTGTTGTATCATTTAACCTTGGCTCCCTTGGTTTTCTGACTTCTCATCATTTTGAAGATTACATGCAGGACTTACGTCAACTCATCCATGGAAATACTACACGAGATGGTGTATACATCACTCTCAGAATGCGTCTTCGATGTGAACTTTTTCATAAGGGTAACACAGTACCTTGGAAAGTATTTGATGTCCTTAATGAGGTGGTTGTTGATCGGGGCTCTAATCCTTACCTTTCAAAGATAGAATGCTATGAACATGGTAGACTTATAACCAAGGTACAAGGTGATGGAGTCATTGTAGCTACCCCAACGGGAAGTACAGCCTATTCTACAGCTGCTGGAGGTTCCATGGTACATCCAAATGTTCCCTGCATGCTATTTACCCCAATCTGTCCACATTCACTCTCATTCAGACCAGTTATACTTCCAGATTCTGCTCAATTGGAATTAAAGATTCCAGAAGATGCAAGAAGCAATGCATGGGTTTCATTTGATGGGAAGAGAAGGCAGCAGCTTTCAAGAGGAGATTCTCTTCGAATATCTATGAGTCAGCATCCACTTCCCACTGTTAACAAATTTGACCAAACGGGCGATTGGTTTCGTAGCTTGATTCGCTGTCTGAATTGGAATGAAAGGCTTGATCAGAAGGCTTTATAA 3066 0.4217 MVACLCTCHMAFSVDMSSFAVAGMISPSQLRFFKLPQSFGNGAVFGFEFQRKARPRRQLKFVISAELSNSFSLNFGLDSQNLNSFQSHDPSQLPWMGPMPGDIAEVEAYCRIFRTSERLHSALMDALCNPMTGECSVSYEVPSDEKPQLEDKLVSVLGCMISLVNKAREDVLSGRSSSMNPFRVAEVSIMEDELPPLASFRNEMKRCCESLHVALENYLTPGDNRSSDVWRKLQRLKNVCYDSGFPRGDNHPCHTLFANWSPIYLSTSKEDTKFNSEAAFWTGGQVTEEGLKWLLDQGYKTIIDLRAETVNDNFYQAAIHDAIASGKIEVVKIPVEIKTAPTMEQVVRFASYVSDHSKRPIYLHSKEGVWRTSAMVSRWRQYMTRSASQAVSNQAVISDEKLSHHTNEYGKLQDSLMGAERSSLYKDIDSLSDNLSVTCDRSTFTKNDDQEMQSNGTLCRFTDNHGMLSEATIAAKGEESFSGFSNKINPFKAQIPPCDVFSKKEMSSFLGSGKISPQLFFNYKIKRLESLPDSRNMYIGRSHGGVIISNGNNHVPKIADPGSSDGSALVDHLSGEPQIKVGGNSKSVNGSTSNDVKSTINGFSEGKKYSMPTSSVSTAVNKFSDDITNKSPRVGDGRGDSGTALRNEDSGPVEGDMCASSTGVVRLQSRKKAEMFLVRTDGFSCTREKVTESSLAFTHPSTQQQMLMWKSVPKTVLLLKKMGEELMEEAKQVASFLYYQEKMNVLVEPDVHDIFARIPGFGFVQTFYSHDTSDLHEEVDFVACLGGDGVILHASNIFRDAVPPVVSFNLGSLGFLTSHHFEDYMQDLRQLIHGNTTRDGVYITLRMRLRCELFHKGNTVPWKVFDVLNEVVVDRGSNPYLSKIECYEHGRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSAQLELKIPEDARSNAWVSFDGKRRQQLSRGDSLRISMSQHPLPTVNKFDQTGDWFRSLIRCLNWNERLDQKAL 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0280 1021 MobiDBLite consensus disorder prediction 624 658 - -
Lele04g0280 1021 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 280 392 IPR029021 -
Lele04g0280 1021 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 716 1016 IPR016064 -
Lele04g0280 1021 Gene3D Protein tyrosine phosphatase superfamily 275 414 IPR029021 -
Lele04g0280 1021 FunFam NAD kinase 2, chloroplastic 848 988 - -
Lele04g0280 1021 PANTHER NAD KINASE 329 1021 - -
Lele04g0280 1021 FunFam NAD kinase 2, chloroplastic 703 864 - -
Lele04g0280 1021 Gene3D - 848 988 IPR017437 GO:0003951|GO:0019674
Lele04g0280 1021 Pfam ATP-NAD kinase C-terminal domain 868 994 - -
Lele04g0280 1021 Gene3D - 703 1013 IPR017438 -
Lele04g0280 1021 Hamap NAD kinase [nadK]. 714 1012 IPR002504 GO:0003951|GO:0006741
Lele04g0280 1021 FunFam NAD kinase 2 chloroplastic 272 406 - -
Lele04g0280 1021 Pfam ATP-NAD kinase N-terminal domain 737 835 IPR002504 GO:0003951|GO:0006741
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0280 Lele-ChrLele04 1645185 1650268 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0240 25 1435822 1438012 Lele04g0280 04 1645185 1650268 CCT
Lele01g0287 01 1624047 1628179 Lele04g0280 04 1645185 1650268 hybridization
Lele02g0272 02 1545537 1550392 Lele04g0280 04 1645185 1650268 hybridization