Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0272 ATGATTCGGAAAATGAAGAACTGGACAATGCTTTCCGGGGTGGGATCGGACTCAGAATTCAATGATTTGTCCACATTCTCCGATCATCATAGGGCCGCCTACTCTTTACATGGAATCCTAATTAAAACTGCGGAGGGGGGAGAGAGGGGAGGAGAGATAGATTTAGGTCCAACGTCTTTCACAGGAGGGGCCGGTGGTCAAAATCTTGGGCGTTTAAAGTTACGGTTGTCACCCGTAAGGAAAACACCACCTCCTCTGATTTTGACCCGCAACATGAAAATACTGCAAATGGGAGAGCCCGGAGAAGTCCACGGCGGAAGCTCCGGTGGCCGGACGTTGGTCGTGGGAATGAAGTTGGACTCGGCCAGCAAGGAGCTGCTCACTTGGGCTTTGGTCAAAGTCGCTCAGCCTGGTGATGTTGTGGTTGCTCTTAATGTTCTTGGCAACAATCAAATCGTGGATCGAGATGGAAAATTGTCCCTTCTTTCGCTTGTCAACACATTTGATTCTATTCTTGCTGTTTATGAAGGTTTCTGCAATTTAAAACAGGTGGATCTCAAGCTCAAAGTCTGCAGAGGTCCATCAGTCCGGAAAATTTTAGTCCGAGAAGCAAATGCCTATTCTGCAACTCACCTTATAGTAGGAACAGCACATGGCCTCCATACAATTCGGCCATCTTCCTCCGTAGCTAAGTACTGTGCCAAAAAGTTATCCAGAAACTGCTGTGTTCTGGCCATTAATAATGGGAAAGTTGTGTTCAAGAGAGATGGCTCCCCAGCAACTCCTTCTCACCTAAAAGGAATTGATCGTCAGAATAAAATTGGTCTGCTTGAAACTATTCACCGGACATTCAATAAGAGTTCTAAAGTACTAAATGACGACAATACAGAGAATAAGCATGGTAAAGTTTTTCTGAGGTCTAAACAATCTGTGATTCAGAAACCAAGCTGCTCAATATGTGGCTCAATTTCAGCACTGCCAAACACGTCCTGCCAACATTCTGCAGAGAAGCCTTCAGGTGATGGGAGTACTAACGAAAATGCTTTGGCTATAGTGCCTGTACAGACAACTGAGGCAGCATCAAGTACAGAGATCACCTTGTCTGACAGAGAACCACCTGAGCTGAAACCTGGTTGGCCACTGTTACAACGGACAGTTTTATCAGAGAGAGAGTCCCATGATCTATCGTCGATGCGCCAGATATCTGTGGTCCAGTGGGCAATGCGGTTGCCTTGTAGAAATCTTGATCATGATCATAAGAAAACTATAGCTTTAGATGGCAGAAGCGGTGCTATTGTTCCGGTTGATGATGTAATAAGGACAGATTCTTCTTCATCAGACGGCAATTCGAAAAGCATTCCTAAAGAATTGGAGGATCTTCACGAGAAATACTCTTCCTCGTGCAGATTGTTTCAGTACCAAGAACTTTTACTGGCAACTTCAAATTTCTCGCGAGAAAATTTGATTGGAAAAGGAGGAAGTAGTCAGGTTTATAGAGGTTGCCTTCCTGATGGCAAGGAGCTTGCCGTTAAGATTTTAAAGCCTTCTGATGACGTTTTGAAAGAGTTTCTATTGGAAATAGAAATTATCACTACCTTGCAACATAAAAACATTATTTCCCTCCTGGGTTTCTGCTTTGAGGATGGCAATCTTCTTTTGGTCTATGATTTTCTGTATAGAGGAAGCCTTGAAGACAATCTTTGTGGGAATAAGAAAAACCCACTTGTTTTTGGCTGGACTGAGAGATATAAGGTGGCAATGGGTGTTGCTGAGGCTCTGGATTATCTGCATAACAACGGTGCTCAGTCTGTGATCCACCGGGATGTTAAGTCGTCAAATGTGCTGTTATCTAAGGATTTTGAGCCCCAGCTCTCTGATTTTGGTCTAGCTAAATGGGCGTCCACCTCATCTTCACACGTAACCTGCACAGTCGTTGCTGGAACTTTCGGTTACTTGGCTCCAGAGTACTTCATGTATGGCAAAGTCAATGCCAAGATTGATGTCTACGCATTTGGAGTCGTACTACTGGAACTTCTTTCTGGAAGAAAACCCATAGGTGGAGATTACCCTAAAGGTCAAGAGAGCCTCGTTATGTGGGCAGGTCCAATTCTTAATAATGGGAAGGTGTCACAATTGTTAGATCCAAGTTTGAGCCATAACTATGATCATGAACAGATAGAGAGGATGGCATTGGCAGCCGAACTCTGTATAAGACGTGATCCAAGAGCCAGGCCTCCTATGAGCCTTATTTCAAAGCTTCTTCGAGGGGATGTTGATGTGATCAAGTGGGCAGGATTAGAAGTTAACGCCTCAGAGAAACTTGGAATGCTTGACGATGAAGCATGCCCACCTTCAAATTTACAGTCACATCTTAATGTTGCGCTGCTTGACGTGGAAGATGACTCAACGTCCATGAGCAGTGTTGAGCAGAATGTGTCATTGGAGGACTACTTAAGAGGGAGATGGAGCCGTTCCTCCAGCTTTGACTGA 2490 0.4454 MIRKMKNWTMLSGVGSDSEFNDLSTFSDHHRAAYSLHGILIKTAEGGERGGEIDLGPTSFTGGAGGQNLGRLKLRLSPVRKTPPPLILTRNMKILQMGEPGEVHGGSSGGRTLVVGMKLDSASKELLTWALVKVAQPGDVVVALNVLGNNQIVDRDGKLSLLSLVNTFDSILAVYEGFCNLKQVDLKLKVCRGPSVRKILVREANAYSATHLIVGTAHGLHTIRPSSSVAKYCAKKLSRNCCVLAINNGKVVFKRDGSPATPSHLKGIDRQNKIGLLETIHRTFNKSSKVLNDDNTENKHGKVFLRSKQSVIQKPSCSICGSISALPNTSCQHSAEKPSGDGSTNENALAIVPVQTTEAASSTEITLSDREPPELKPGWPLLQRTVLSERESHDLSSMRQISVVQWAMRLPCRNLDHDHKKTIALDGRSGAIVPVDDVIRTDSSSSDGNSKSIPKELEDLHEKYSSSCRLFQYQELLLATSNFSRENLIGKGGSSQVYRGCLPDGKELAVKILKPSDDVLKEFLLEIEIITTLQHKNIISLLGFCFEDGNLLLVYDFLYRGSLEDNLCGNKKNPLVFGWTERYKVAMGVAEALDYLHNNGAQSVIHRDVKSSNVLLSKDFEPQLSDFGLAKWASTSSSHVTCTVVAGTFGYLAPEYFMYGKVNAKIDVYAFGVVLLELLSGRKPIGGDYPKGQESLVMWAGPILNNGKVSQLLDPSLSHNYDHEQIERMALAAELCIRRDPRARPPMSLISKLLRGDVDVIKWAGLEVNASEKLGMLDDEACPPSNLQSHLNVALLDVEDDSTSMSSVEQNVSLEDYLRGRWSRSSSFD 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0272 829 Pfam Universal stress protein family 111 239 IPR006016 -
Lele04g0272 829 MobiDBLite consensus disorder prediction 356 378 - -
Lele04g0272 829 Gene3D Phosphorylase Kinase; domain 1 444 557 - -
Lele04g0272 829 Gene3D Transferase(Phosphotransferase) domain 1 559 762 - -
Lele04g0272 829 FunFam Putative receptor-like serine/threonine-protein kinase 558 770 - -
Lele04g0272 829 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 452 557 - -
Lele04g0272 829 PANTHER OS08G0249100 PROTEIN 306 762 - -
Lele04g0272 829 ProSiteProfiles Protein kinase domain profile. 483 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0272 829 SMART serkin_6 483 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0272 829 Pfam Protein kinase domain 484 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0272 829 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 110 247 - -
Lele04g0272 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Lele04g0272 829 CDD USP_Like 112 246 - -
Lele04g0272 829 ProSitePatterns Protein kinases ATP-binding region signature. 489 511 IPR017441 GO:0005524
Lele04g0272 829 SUPERFAMILY Protein kinase-like (PK-like) 464 752 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0272 Lele-ChrLele04 1604021 1608234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0272 470 753 Trihelix Transcription Factor Family AT1G68690 43.253 1.29e-69 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele04g0272 Pkinase 8.8e-43 CL0016