Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0261 ATGCAAAAGAGGAGAAATAAAGGGGGAATGGCATCGTCATCGAATTCACCGTGTGCGGCTTGCAAGTTTCTGCGGCGAAAGTGCCAACCGGAGTGCGTGTTTGCACCCTACTTCCCACCAGATCAGCCACAGAAATTCGCAAATGTTCACAAAGTATTTGGAGCGAGCAATGTCACCAAGCTCCTGAACGAGTTACACCCCCACCAGCGTGAAGACGCCGTCAATTCTCTGGCCTACGAGGCCGACATGCGCCTCCGTGACCCCGTCTACGGCTGCGTAGGAGTGATCTCTCTCCTGCAACATCAACTCCGGCAGCTGCAAATGGACCTCACCTGCGCCAAGTCGGAGCTGTCCAGGTACCAAACCTTGGGCATCACCGGGCACAGCCTCATCGCGGCTCACCACCAGGCTCAGAACATGGGCATGAACCTGATCGGTGACCACCACTACCACCACCACCAGTTCTTCCCTCGGGACCACCATCAGTCTTCCATGATCAGGACCTTTGATGCGGGTAACAACTATGACGGCGGTCTCCTCTCTATGAACGTCTCCGCAAGCATAGGGCAGCTCAATCAGTTTCAGCATCAGCACCCTAGAGCTGCTGCCGGCGACGATCGTCGGACTATTGATCCCTCTTAG 642 0.5561 MQKRRNKGGMASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLTCAKSELSRYQTLGITGHSLIAAHHQAQNMGMNLIGDHHYHHHQFFPRDHHQSSMIRTFDAGNNYDGGLLSMNVSASIGQLNQFQHQHPRAAAGDDRRTIDPS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0261 213 Pfam Lateral organ boundaries (LOB) domain 17 114 IPR004883 -
Lele04g0261 213 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 14 154 - -
Lele04g0261 213 ProSiteProfiles LOB domain profile. 16 117 IPR004883 -
Lele04g0261 213 Coils Coil 96 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0261 Lele-ChrLele04 1551473 1553658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0261 11 213 AS2 family AT1G65620 71.963 1.66e-94 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele04g0261 LOB 3e-43 No_clan