Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0260 ATGGACATCTCTATGTTTGTCTCCGAGATTTGTTACAATCAATCAGGAGGAGTGGATCACGGCTTTATTTCCTCTCTCAAAATCTTTGCTTTCCCCATTTCTAGCTCCGAAAAAAAGTTCGTAAGTGTAGGTTGTGACGGTTATGGCTACATAAAAAGCTTTGACGCTGAGCAGAATTATTATTCCGCTGGCTGCTCATCGCAATGTAAACAACATCCCCCACTAGCACAGAGTACTGGTGAAACTTGTTCCGAAATTGGGTGTTGCCAAGTCGATATTCCTCCTCGAATGAGGAATATCACTCTAGAATCACAGCTTCGACAGTCATCAAAATGTGCGCCTTCAACAACTGCACCTATGCTTTTGTTGCCAAACAAGGCTCCTTTAATTTCTCTCCTCATTATCTTGAGCGTCTCCCCTTTGACGAGTCCGAGAACTTCGACTGTGGATTCGGATACAGATGCTTTTGGAAGTCGGGGTTTCTTGGAAATCCATAACTTCCTGATGGATGTCAGGTGCAACAATTTCGATGGTGGCTACAACTGTTCTTGTGCACCTGGTTATCAAGGCGATGGCTATGTTAATGGAACCCGCTGCACTTGGGACACACCTCTTCAGTCTAATCCTCATTTGCTTTCTCTTATAATAGCACTAGGCGTTTGTGTAACCTTGTTAGTTGGCTTCACCCTAGTCTCCTCATTATGCTGGGCACACAAGCAAAGAACTCTGAAACAAATTAGGCAAAGAAATTTCGAGCAAAATGGAGGAAACATGCAGCTGCAAAGACTTTCACAACAAGAAGGATACGCTGACAGAACCAAAATATTTACACAAGTGGAGCTTCAGAATGCCACAAACAACTTCGACGAAGATAGAATCCTTGGCCGTGGGGGACAAGGCACAGTTTACAAGGGTATATTACCGGACAACACAGTGGTTGCCATTAAGAAGTCTAGAGTAGGAGGGGATCCCAGACAGATTAAGGATTTTATCAATGAAGTGGTCGTGCTTTCCCAAATCAACCATCGGAATGTGGTCAAACTTTTGAGTGATGTTTATAGCTTTGGGGTTGTGCTTGTAGAGCTATTTACCGGAAATAAAGCAGTTGAATACAATAGACTGGAACAGCGAAATTTGGCAATGTACTTTGTGTCTACAATAAAAGAAGACCGTTTATGGGAAATTGTTGATAAGCAATTGTTAGATCAGGAGAATAATGCTCAACAGTTGAAGGAAGTTGCTTTTCTGGCAAGGAGGCATACTTGGGTGAAGGGTGGAGATACCATGGCAGAAGAAATTGAATGCTTAATTGTTCATGTGGCTGATGAATATGGGGGTACCAGTTCTAGCAATTCATCTCGATATGATACCATACGAAAGCAGATAGCATTTGAGATTGCAGATGGGCGTTGA 1413 0.4268 MDISMFVSEICYNQSGGVDHGFISSLKIFAFPISSSEKKFVSVGCDGYGYIKSFDAEQNYYSAGCSSQCKQHPPLAQSTGETCSEIGCCQVDIPPRMRNITLESQLRQSSKCAPSTTAPMLLLPNKAPLISLLIILSVSPLTSPRTSTVDSDTDAFGSRGFLEIHNFLMDVRCNNFDGGYNCSCAPGYQGDGYVNGTRCTWDTPLQSNPHLLSLIIALGVCVTLLVGFTLVSSLCWAHKQRTLKQIRQRNFEQNGGNMQLQRLSQQEGYADRTKIFTQVELQNATNNFDEDRILGRGGQGTVYKGILPDNTVVAIKKSRVGGDPRQIKDFINEVVVLSQINHRNVVKLLSDVYSFGVVLVELFTGNKAVEYNRLEQRNLAMYFVSTIKEDRLWEIVDKQLLDQENNAQQLKEVAFLARRHTWVKGGDTMAEEIECLIVHVADEYGGTSSSNSSRYDTIRKQIAFEIADGR 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0260 470 Gene3D Phosphorylase Kinase; domain 1 258 355 - -
Lele04g0260 470 CDD EGF_CA 172 191 - -
Lele04g0260 470 SUPERFAMILY Protein kinase-like (PK-like) 265 349 IPR011009 -
Lele04g0260 470 SUPERFAMILY Protein kinase-like (PK-like) 350 405 IPR011009 -
Lele04g0260 470 Pfam Protein kinase domain 289 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0260 470 Gene3D Laminin 165 203 - -
Lele04g0260 470 ProSiteProfiles Protein kinase domain profile. 288 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g0260 470 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 350 430 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0260 Lele-ChrLele04 1546926 1549475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0260 350 470 Receptor kinase-like Gene Family AT1G21250 33.784 1.52e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lele04g0260 Pkinase 7.8e-08 CL0016