Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0247 ATGGAGGATTCTTCTTCATCTGCAGTTGAGGACACCAAGACTTGCCCTCGCGGTCACTGGAGACCCTCCGAGGATGAGAAACTCCAGCAACTTGTTGAACAATATGGTGCCCAGAACTGGAATTCAATTGCCGAGAAGCTCCAAGGAAGATCAGGGAAAAGTTGCAGATTAAGGTGGTTCAATCAGCTTGATCCTAGGATTAACAGAAGGCCATTTACAGAAGAGGAAGAAGAGAGGCTACTGGCAGCTCATCGCATCCATGGGAATAAGTGGGCACTCATAGCGAGGCTTTTCCCAGGTCGTACCGATAACGCTGTGAAGAATCATTGGCATGTTATAATGGCGCGCAAGCAAAGAGAGCAATCTAAGTTATGTGGGAAGAGAAGCTTTCAAGATGTTTATAACTTTAATGATTCTAGTTACAGTAGTTCCTTCAAGAAAATGACATCGACTTCTTATCAGGATGTGTTAATTAGCTCCAGGATGAATGGGTTAGAGAATACCAGATTCTTTGATTTCCGTAACCTTGATCATAAAGAGAGAATATTTGCCGATTCTCCCTCCACTTCTTTGGCTTCCTGGAGTTTTGCAACCTCCTCATCAAACGGTTCTCCTGTCGCGGATTCATTTAGAAGAGAAGGCAGAGATTTCTTCAACTCTCACTCCAATAATCATTACATATCAGAAATAATGCCCAAAGGTTCAGATAGGTTTCATTGCAGAATTTATCCGAATTCTTCAGCAAATTACAGGAGAGTGGTTCCATCAGGTGCTTTAGGACTTTTTGGTTCCGATGATGATGGAAAGACAAAGAGGGACTTCACCATTTTCTGTGATAGTTCGACATTCACCAAGTTACGGGCTTCTACGGATCAGCGAGGGCAAGAAGATCACCAGCCAATTGAACATAAAGAAGTTCCTTTTATCGATTTTCTTGGTGTGGGTGTCTCTTCGTCATAA 960 0.4292 MEDSSSSAVEDTKTCPRGHWRPSEDEKLQQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGKRSFQDVYNFNDSSYSSSFKKMTSTSYQDVLISSRMNGLENTRFFDFRNLDHKERIFADSPSTSLASWSFATSSSNGSPVADSFRREGRDFFNSHSNNHYISEIMPKGSDRFHCRIYPNSSANYRRVVPSGALGLFGSDDDGKTKRDFTIFCDSSTFTKLRASTDQRGQEDHQPIEHKEVPFIDFLGVGVSSS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0247 319 Gene3D - 17 68 - -
Lele04g0247 319 CDD SANT 71 111 IPR001005 -
Lele04g0247 319 FunFam MYB transcription factor 17 68 - -
Lele04g0247 319 MobiDBLite consensus disorder prediction 1 23 - -
Lele04g0247 319 PANTHER MYB PROTEIN-RELATED 17 160 - -
Lele04g0247 319 CDD SANT 20 61 IPR001005 -
Lele04g0247 319 SUPERFAMILY Homeodomain-like 16 110 IPR009057 -
Lele04g0247 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Lele04g0247 319 Pfam Myb-like DNA-binding domain 20 80 - -
Lele04g0247 319 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Lele04g0247 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 63 IPR017930 -
Lele04g0247 319 SMART sant 16 65 IPR001005 -
Lele04g0247 319 SMART sant 68 116 IPR001005 -
Lele04g0247 319 ProSiteProfiles Myb-like domain profile. 17 63 IPR001005 -
Lele04g0247 319 Gene3D - 71 131 - -
Lele04g0247 319 FunFam MYB transcription factor 70 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0247 Lele-ChrLele04 1473383 1474758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0247 15 124 MYB Transcription Factor Family AT1G17950 82.727 2.14e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele04g0247 Myb_DNA-bind_6 8.7e-17 CL0123