LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele04g0243	ATGGTAATAGGCAGGCACGCATGTGCATCAGAGGAGCTAATACAAGAACAGGATTTGACTTCATTCCAGAGACAGACCGAGGTTCCCACTGGCGTTCTTGATTATTTTCTTCCGTTTTGTTCGGAGGCTTTCGCTGTTCAATTTCAACTCCTGGTGAGTTCTCGCTATTCTACCACTTTGACCCTTTCTACTCTTAGATTCATGCGAAAGCCGTTTGAAGGTTGCTTATCTGACCGCACCAATGCAACTGTGATGTTCAGAATCGAAGTAAATCCTCTGGAGCTTGAAGCCTTACGTTTTGACCTCAACATTGAAAAGATGGTACCCCCGGGACCACCCACTCCGATTGGTGGTGCCCAGTCTGTCCCATCCTCCCTCTTGAGATCTAATTCTGGGATGTTGGGAGCTCAAGGGGGTCCGGTGCCTTCACAGTCTTCTTTTCCCTCGCTTGTGTCACCACGGACTCAGTTTAACAACATGAACATGCTAGGAAATATGTCCAATGTATCTTCCATGCTGAATCAGTCTTTCCCAATTGGGGTTCCAAATTCTGCGCTCTCTGGTCCCGGAAGTAGCCAGCGAGGAGGCATTGATGCTGGAGCTAAAACAGATACTCTCTCCAGTGTTGGCAATGGAATGAACTTCAATAATAACTCATCCTCGTTTGTACAATCAAATATGGTGAATCCCGGTCCATCTGGTCAAGGTCAGGGTCAACAATTTTCAAATCCTTCTGGTAACCAACTGTTGCCAGATCAACAGCATTCTCAACAACTTGATACTCAAAATTTCCAACATAGTCAGCAGTCATTGCAACAGTTCTCAGCTCCCCTGAACTCTCAGCAACAACAGCAGCAGCAACATTTTCAATCAATTCGAGGAGGGATAGCTGGCATAGGACCTGTTAAATTGGAGCCCCAAGTAAACAATGATCAACTTGGGCAGCAGCAGCAGATGCAATCATTGAGGAATCTTGCACCAGTGAAATTGGAACCTCAACAAATGCAAACAATGAGATCTATGGCTCCAGTGAAAATGGAGCCCCAGCATTCTGACCAGTCATTATTTTTGCATCAACAGCAACAGCAGCAGCAACAGCAGCAACAATACCTCCATATGTCAAGGCAACCCTCTCAGGCTACTGCTGCTCAGCTTAATCTATTGCACCACCAGAGACTGTTGCAATTACAACAGCACCAACAACAACAACAACTCTTGAAGGCAATGCCTCAGCAACGGCCACAACTACAGCAGCAGTTTCAACAACAGAATATGCCTACAAGGACTTCCGGAAAGCCAGTTTATGAACCTGGAATGTGTGCTAGGCGGCTGACGCATTACATGTATCAGCAACAGCATAGACCTGAAGATAACAACATTGAGTTCTGGAGGAAATTTGTTGCTGAATATTTTGCTCCTAATGCCAAAAAGAAGTGGTGCGTTTCTATGTATGGAAGCGGCAGACATACAACTGGGGTTTTTCCTCAGGATGTATGGCACTGTGAAATATGTAATCGCAAACCTGGCCGGGGGTTTGAAGCAACTGTTGAGGTACTTCCCAGGCTCTTCAAAATAAAGTATGAAAGTGGCACTTTGGAAGAGCTACTTTACGTAGACATGCCTCGCGAGTATCATAATTCCTCTGGTCAGATTGTCCTGGACTATGCGAAAGCAATACAAGAAAGTGTTTTTGAGCAACTCCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTTTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGTCATGAGGAACTTATCCCAAGAAGACTGTTAATACCTCAGGTTAGTCAGCTTGGAGCTGCTGCTCAAAAATACCAGGCTTTTACTCAGAATGCCACACCTAATTCATCTGTTCCTGAGTTACAAAATAATTGCAATATGTTTGTTGCATCTGCTCGTCAGTTAGCAAAAGCCCTAGAGGTGCCATTGGTTAATGATTTAGGATATACAAAGAGATATGTGCGGTGCCTACAGATATCGGAAGTGGTAAATAGTATGAAAGACTTGATTGATTACAGCCGAGAAAAAGGGATTGGACCTATGGAAAGCTTGGCCAAATATCCTCGGAGAACTGGTAGTTCATCTGGAGTCAATAGTCAAACTCAACTGCCTGAAGATCAATTACAGCAGCAGCAGCAACAACACATGGTGGCCCAAAACTCAAATGGTGATCAAAACTCGGTGCAACCTGCTGCTGTGCAAATAGCTTCTAGCAATGGGGTTGCTGGTGCAAATAACTGTATCAACTCGGTATCTGCATCAACTACCCCAAGTACCATTGTTGGACTTCTCCACCAGAATTCTATGAATTCTAGACAACAGAATTCCATGAACAATGCCAGCAGTCCGTATGGAGGTAGTTCTGTTCAGATACCATCCCCAGGTTCGTCCAGTTCTGTGCCACCATCACAGTCAAACCTATCGCCCTTTCAAGCACCAACACCATCCTCATCTAGCAATCCACCACAAACTTCTCACTCATCTTTAGCAGCTGGCAATCACATGAATTCATCTAATTCACCGGCTAATGTTTCCTTGCAACAACAGCAGTCATCCCTTTCTGGTGAAGCTGACCCCAGTGATGCTCAGAGTTCAGTTCAAAAAATCTTATCAGGGATATACACCCAAAATAATGGCACTGGTGGAATGGTAGGTGTCGGCTCTTTTGGAAATGATGTCAAGAATGTGAATGGGATTATGCCCGTGAGTAACAATACAGGTCTTAATAGTGGCAACTGCCTTCCTGGCAATGGGCCTGTGAATGGTAATTCAGGTGTTGGGGCTGGTGGATATGGTGCGATGGGCGGTGGGCTCGGCCAATCTGCCATGGTCAATGGGATCAGAGCTGCTATGGGAAATAACTCTATTATGAATGGGAGGGGAGGAATGGCAACTATTGCTCGAGACCAAGCTATGAGTCATCAACAAGATTTGTCAAACCAACTACTTAGTGGGCTAGGAGCAGTAAATTGTTTTAATAATCTTCAATTTGATTGGAAATCTTCCCCATGA	3051	0.4487	MVIGRHACASEELIQEQDLTSFQRQTEVPTGVLDYFLPFCSEAFAVQFQLLVSSRYSTTLTLSTLRFMRKPFEGCLSDRTNATVMFRIEVNPLELEALRFDLNIEKMVPPGPPTPIGGAQSVPSSLLRSNSGMLGAQGGPVPSQSSFPSLVSPRTQFNNMNMLGNMSNVSSMLNQSFPIGVPNSALSGPGSSQRGGIDAGAKTDTLSSVGNGMNFNNNSSSFVQSNMVNPGPSGQGQGQQFSNPSGNQLLPDQQHSQQLDTQNFQHSQQSLQQFSAPLNSQQQQQQQHFQSIRGGIAGIGPVKLEPQVNNDQLGQQQQMQSLRNLAPVKLEPQQMQTMRSMAPVKMEPQHSDQSLFLHQQQQQQQQQQQYLHMSRQPSQATAAQLNLLHHQRLLQLQQHQQQQQLLKAMPQQRPQLQQQFQQQNMPTRTSGKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRHTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAFTQNATPNSSVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSREKGIGPMESLAKYPRRTGSSSGVNSQTQLPEDQLQQQQQQHMVAQNSNGDQNSVQPAAVQIASSNGVAGANNCINSVSASTTPSTIVGLLHQNSMNSRQQNSMNNASSPYGGSSVQIPSPGSSSSVPPSQSNLSPFQAPTPSSSSNPPQTSHSSLAAGNHMNSSNSPANVSLQQQQSSLSGEADPSDAQSSVQKILSGIYTQNNGTGGMVGVGSFGNDVKNVNGIMPVSNNTGLNSGNCLPGNGPVNGNSGVGAGGYGAMGGGLGQSAMVNGIRAAMGNNSIMNGRGGMATIARDQAMSHQQDLSNQLLSGLGAVNCFNNLQFDWKSSP	1016

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele04g0243	1016	PANTHER	LIM DOMAIN-BINDING PROTEIN	315	1004	IPR029005	-
	Lele04g0243	1016	MobiDBLite	consensus disorder prediction	697	742	-	-
	Lele04g0243	1016	MobiDBLite	consensus disorder prediction	204	288	-	-
	Lele04g0243	1016	MobiDBLite	consensus disorder prediction	701	742	-	-
	Lele04g0243	1016	MobiDBLite	consensus disorder prediction	784	877	-	-
	Lele04g0243	1016	MobiDBLite	consensus disorder prediction	184	288	-	-
	Lele04g0243	1016	Pfam	LIM-domain binding protein	443	697	IPR029005	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele04g0243	Lele-ChrLele04	1442588	1449662	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele04g0243	107	1014	C2H2 Transcription Factor Family	AT1G43850	60.906	0.0	781

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele04g0243	04	1442588	1449662	Lele04g0243	04	1442588	1449662	ECH
	Lele01g0245	01	1392291	1398594	Lele04g0243	04	1442588	1449662	hybridization
	Lele02g0237	02	1345228	1352281	Lele04g0243	04	1442588	1449662	hybridization